Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_14344 |
Symbol | |
ID | 5000332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | + |
Start bp | 784648 |
End bp | 786804 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | |
GC content | 60% |
IMG OID | 640415753 |
Product | ClC family transporter: chloride ion channel |
Protein accession | XP_001416248 |
Protein GI | 145342557 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCTGT TTATGATCAC GGCGGCGGTG TTGGGGACGC TCGGGGGATG GGTCGCGACG TATTACGCGC CGTTAGCGAG CGGAGGGGGC GTGACGCAGG TGATGGCGAG TTTAAACGGC GCAAACGTGC CGGGATTATT GAGCGGGCGG ACGCTCGCGG CGAAAATCGT GGGCACGTGC GGCGGCGTGG GGAGCGCGTT GGCGGTCGGA CCCGAAGGGC CGATGGTGCA CATCGGCGCT GGGATCGCCA GTGTGTGCGC GTTGTATTGG CCCAGGAAGT TCTTGTGTGG AGATGGATTC TTGGGGGCGA GAGAGGGCGA GGCGGACGCG TCGGCGGCGA GCGAGGACGA GGATTCCGAA GACGAGGATT CCGAGCGATA TTCTACGGAT GGCGAAGATT CAGACGGTAG TGAATTGCAG TCGACGTTAC GGCGGCGAAG GCGGCAACGT CGTCGTGCGT TCGTGCGGTT CGGCGAGTCG GCGAAATTAG ACGCCGTGCT GCTCGAGTTG GCGTCGCCGT CGACGCATAG AGAATTCGTC TCCGCTGGCG CCGCCGCCGG ATTAGCCGCG GCTTTCGGTG CACCCATCGG AGGAGTTTTG TTTTCTTTTG AAGAAGCGAG CACGTTTTGG AGTCAACGCA CGATGTGGCG GTGCTTGATG TGCGCTGCCA TCGCGTCCTT CGTGCTCGCG TTGCTCGATT TGCGAGGCAA CCCAGGCATG GTGTTCATCA CCGGTGACTC GCTTCGACCG ACTACGCCGA GGGACTACTT CCACCAACTA CCATTCTTTG TTTTAGTAGC TGCCATAGCG GGACTCATGG GGGTGTTGTT CAACCAAATT CAGGCGTGGA CGTCGAGGTT TCGTCCGTCT GCGAAGAATA AAGTCGCACG AATGTTTGAG TGCGCCGTCG TCGTTCTCGC CACGGTGGCG CTTCGGTTCG CGGCGGCGGA GTTCGCGGGA CACTGCATGG TGCCTCCCGA TACCTGGGTG AAAGACGATT TCGGTGTACG ATTCAACTGC GCCGAGGGAG AAATTAACGA CATCGCTACT GTATTTTTCA TTTATCCAGG CCGTTCAATC GGCTGGATGT TCGGCATGGC TGAGCACGTG TGGGGCGAGG CGTACGGGTT CACGGCGCAA GGTTTAGCCA TATCCGCGGT GTGTTATCTC GTTATGATGG CGCTAGCGTT CGGCATCGCC GTTCCTGGTG GCTTATTTAT GCCGTCGTTG TTCATGGGCG CGTGCACGGG AGGATGCGCG GGGTTAATGC TCAAGGCGTC GTTGCCCGAA GCGTGGGACA TCCAACCAGG GCTCTACGCG CTCATCGGTG CCACCTCCGC GCTCGGTGGC GTTTTCCGTT CCTCCGTGTC TCTGGTCGTT ATCATGGTCG AGAGCACCAA CGGACAGGCT TTCGTGTTCG CCATCATCGT CGCCGTCATC GTGAGTAACG TGGTAGGAAA TTACTTCGCG CACGGCATTT ACCACGCCGA GTTGTCGCGA AGTAAAACTG TGGCCTACCT ACCTCGAGAT CCTTCGAGAA CGCTCGAGGG GAAGACTGCG CGCGATATCA TGGCGGTTCC ACCCGCGTTT TTACCCGAAG TTGCTTTTAG AGACGACGTC AAGTCGTTGC TCGAGCACAC GACTCACAAC GGATTCCCAG TCGTCGACGA CCGCGGGAAA CTCGCCGGTC TCATCTTGCG TTCGCAGCTC GACGTTCTTC TCGCGGCGCC GCCCGAGGAA GCCGCGCCCG GTGCTGACGC TACCAAGCAG GCAAAATTGG ACCTTAAAAT GCGCACTGCG CATATTCAGC GCGTCACCAA GGGCGCGACG CCCGGCGTCG CCGCTGGACT TCTCGACGAA ACCGTCGACG CCATCGAAGT CGAGCGCTTA ATGCGCACCA ACGCCACGCC GCGCCGCGGC GCGCTGACAG ACCCCGAAAA CGATTCCAAC GACATCGCGA GCGCATTCGC ATCGCCGCAG ATCGACATCA AGACGTACAT GAACCCGTCG CCGCTCGCCG TGCCTTTGGA TTTCCCCGCC GCGCGCGCGC ACGGCGTCTT TCTCTCACTC GCGTTGCGCC ACCTCATCGT CGTCGACGAC GACTACGCCG TGCGCGGCGT CATCACTCGC AAAGATCTAA TCGGTTTAAA CGCTTGA
|
Protein sequence | MSLFMITAAV LGTLGGWVAT YYAPLASGGG VTQVMASLNG ANVPGLLSGR TLAAKIVGTC GGVGSALAVG PEGPMVHIGA GIASVCALYW PRKFLCGDGF LGAREGEADA SAASEDEDSE DEDSERYSTD GEDSDGSELQ STLRRRRRQR RRAFVRFGES AKLDAVLLEL ASPSTHREFV SAGAAAGLAA AFGAPIGGVL FSFEEASTFW SQRTMWRCLM CAAIASFVLA LLDLRGNPGM VFITGDSLRP TTPRDYFHQL PFFVLVAAIA GLMGVLFNQI QAWTSRFRPS AKNKVARMFE CAVVVLATVA LRFAAAEFAG HCMVPPDTWV KDDFGVRFNC AEGEINDIAT VFFIYPGRSI GWMFGMAEHV WGEAYGFTAQ GLAISAVCYL VMMALAFGIA VPGGLFMPSL FMGACTGGCA GLMLKASLPE AWDIQPGLYA LIGATSALGG VFRSSVSLVV IMVESTNGQA FVFAIIVAVI VSNVVGNYFA HGIYHAELSR SKTVAYLPRD PSRTLEGKTA RDIMAVPPAF LPEVAFRDDV KSLLEHTTHN GFPVVDDRGK LAGLILRSQL DVLLAAPPEE AAPGADATKQ AKLDLKMRTA HIQRVTKGAT PGVAAGLLDE TVDAIEVERL MRTNATPRRG ALTDPENDSN DIASAFASPQ IDIKTYMNPS PLAVPLDFPA ARAHGVFLSL ALRHLIVVDD DYAVRGVITR KDLIGLNA
|
| |