Gene OSTLU_13493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_13493 
Symbol 
ID5006674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp517542 
End bp518312 
Gene Length771 bp 
Protein Length256 aa 
Translation table 
GC content58% 
IMG OID640422095 
Productpredicted protein 
Protein accessionXP_001422616 
Protein GI145356806 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID[TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATC GTTCGTCCTC GACGTGGGAC GCCACGCAAA CGCAAGAAGA CTTCATGCGA 
AACGACCGCG TGATCGTTGT TTCGGCCGCG GATGACGTGC TCGGGAGCGA GACGAAGGAA
AACGCGCACA AGTTCATCGA AGGGTCGTCG ACGACGCCGC GCGGGACGCT GCACCGAGCG
TTTAGCGTGT TCCTGTTCGA TGACAGCGGA CGGTTGCTGC TGCAACAGCG CGCGGCGAAT
AAAATTACAT TTCCGAGCGT TTGGACGAAC ACGTGCTGCT CGCATCAGCT GACGGGACAG
AAACCAGATG AGATGGACGA CGCGTCGGCG ATCGCGAGCG GGGCGTGCGA CGGCGCGAAA
CGCGCGGCGA CGAGGAAATT GAAACATGAA CTCGGTATCG ACGCCAAGGA CGTGCCGACG
GAGAGCATCA AATTTTTGAC GCGTTTACAT TACTGCGCCG CGGATGAGTT CGCCGAGAAT
GCGAATCAAC CGGTGGGAGG GACGTGGGGC GAGCACGAGA TGGACTACAT TTTGTTTGCG
AAAATCGCGC GCGCGGGCGA GTCGTTGCCG ATGGCGGTAA ACGCGGAAGA GATCGACGAC
ACGAAGTGGG TGACTGCAAG CGAACTTAAG GCGATGATGG ACCAGTCCAG TGGGTTGCGA
TGGAGTCCGT GGTTTAGGAT CATCGCCGAG AAGTTCTTGT ATGCGTGGTG GACCGACTTG
GACTCGCTCG ACAAGCACGT CGACGTCGAG ACGATTCACA AGGTGATGTA G
 
Protein sequence
MGNRSSSTWD ATQTQEDFMR NDRVIVVSAA DDVLGSETKE NAHKFIEGSS TTPRGTLHRA 
FSVFLFDDSG RLLLQQRAAN KITFPSVWTN TCCSHQLTGQ KPDEMDDASA IASGACDGAK
RAATRKLKHE LGIDAKDVPT ESIKFLTRLH YCAADEFAEN ANQPVGGTWG EHEMDYILFA
KIARAGESLP MAVNAEEIDD TKWVTASELK AMMDQSSGLR WSPWFRIIAE KFLYAWWTDL
DSLDKHVDVE TIHKVM