| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119597 |
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| Symbol | Syt1 |
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| ID | 5000191 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 623766 |
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| End bp | 625559 |
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| Gene Length | 1794 bp |
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| Protein Length | 578 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 640415612 |
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| Product | synaptotagmin, Ca2+-dependent lipid-binding protein, putative |
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| Protein accession | XP_001416198 |
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| Protein GI | 145342455 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5038] Ca2+-dependent lipid-binding protein, contains C2 domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.175619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTGTT ACACGAAAAT CAACGCGGCT GTCCCTATCA AAGGTAAGAC GCGTACGCGT
ACGCGTTCTC GATTAATCGG TACATGGTCA CATTGTTCCA TGCATTCGTT GCACATTGGG
CTGTGTATGG CTTGCAGTCG TGCTACCTGC CAGAAATCAG CCTTGCCGTC GTCCGATGCA
AGTTTTACTA GGTTGAAGCT ACTTTCTACG AGAAAAGAAT ACAACGCGCG ACGATCGATC
ACATGCAGCT CTTTAAATAT CGACTTCGCA AACTCCCTTC TGCCCTTTAG TAGCCCTGAT
ATGTTTCTCG GAGTGTTGGA CTCAGCGTCT GTATACGAAA CAGTGCTTCT GACGGTAGAG
TTCAAAACGC TTGCGCTTGG ATTCGTTGCT GGCATCATGA CCACAAGTTT CATCGTTTAT
CTCACTCAGC GGGGTAGGCG CCGAAAATCT AAAACCCTCA CTCGGCAAGC TTTAGCAGAG
TTGAGTGCCC TTGAAGAGCT GGAAACCCTG GACCTCCTTG GCGACATCCC GGCGTGGTTG
ACTTTTAGCG ATGTTGAGAG ATCAGGTTGG CTCAATAAAG TTGTTAAAGC CGCTTGGCCT
TATTTGGATG CGGCCACTTC ATCAGTCATC GTGAAGGCCT TAGATCCAAT ATTGCGAAAT
ACACGGCCAA GTTTCTTGAC ATCGTTACAG TTTGAGAGAT TCAGTTTTGG TAGTGTTCCA
GCTATCATTG AAGGTGTCAA GGTATATGAA TCGAGTGAAG AAGGTGCTTT GGAAATCGAT
TTAAAAGTGT TTTGGGCAGG AGATCCTGAC GTTGTTCTGA AAATACGAGC AGCACAAGAT
GCGTTAGCAG TTCCAGTTTC TTTAACGGAA TTTGAGTGCA CGTTCACTCT TCGACTGATT
TTTGCACCAC TCATTGGAAT CTTCCCATGC TTCGGGGCGC TCACAATTTC ATTGACTGAA
AATCCGGATG TAAATTTCGA TCTTCGCGTT GTAGGAGGAG ACATAACGCT TCTGCCTGGT
CTTGCGCAGC CACTTCAAAC ATACATCCAG GCCTTAATTG CATCTTTTCT CGTCTGGCCT
CGTTGCATCA CTGTGCCGAT TCCAGGTACG GGTTACTCAC TTCCAGATAT GGAACGCGCA
AACGCCGGTC TACTTCATGT TGAAGTACAT TCTCACGATG AAACATTGGC TTCAGAAGCT
GAAATTGCTA TCCAACTCCG TTGGCCCGGT GCATTGAGCA CAGATATGTC TCAAGAAGTG
CGCGTACACG CTTTGCCCGG TGGCAGGTTT TTGAACTCTC GAGAAATCAC ACTTCCCGTG
GAGGACATGA CTAGACAGAT ATTGAGTGTG CGTTGGTATT CAAGCCCTAA AGACCAAGGC
GAGGCGAGGC AATTGACAGG TGAAACTAGT CTATTATTGG ATGACATAGT TAGTCAGATC
GATTTTGAGT CTTCGGGAGA GTTAAAAGAC TGGGGTCCCG TCACCATAGC TGTAGAACTT
GAATCCACAA ATAGTGAAAA TGCGAGCAGA GATGCCGTAA AACGAAAAAG TTCGATGTAC
GGCAGGATGA TCAAGGTAGG TTCTGACCTT TTATCGCGGG GCAAGCGTTT TTCGAAAAAA
TCTACTACGA AGGTGTCTAG AGGACCCGAA GATAACAATG TGGATAGATG GTTACATGTC
CGAGCGCGTA TAGTTCAACT GACTGTTAGA TACCAGTCCA TTGATTCTAT GCGTGCACCT
CTCTCATCTT CACAGGGTTT CCGCTTGCGT GAAAACGAAC AGAACGAGGA TTGA
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| Protein sequence | MTCYTKINAA VPIKGKTRTR TRSRLIGTWS HCSMHSLHIG LCMACSRATC QKSALPSSDA
SFTRLKLLST RKEYNARRSI TCSSLNIDFA NSLLPFSSPD MFLGVLDSAS VYETVLLTVE
FKTLALGFVA GIMTTSFIVY LTQRGRRRKS KTLTRQALAE LSALEELETL DLLGDIPAWL
TFSDVERSGW LNKVVKAAWP YLDAATSSVI VKALDPILRN TRPSFLTSLQ FERFSFGSVP
AIIEGVKVYE SSEEGALEID LKVFWAGDPD VVLKIRAAQD ALAVPVSLTE FECTFTLRLI
FAPLIGIFPC FGALTISLTE NPDVNFDLRV VGGDITLLPG LAQPLQTYIQ ALIASFLVWP
RCITVPIPGT GYSLPDMERA NAGLLHVEVH SHDETLASEA EIAIQLRWPG ALSTDMSQEV
RVHALPGGRF LNSREITLPV EDMTRQILSV RWYSSPKDQG EARQLTGETS LLLDDIVSQI
DFESSGELKD WGPVTIAVEL ESTNSENASR DAVKRKSSMY GRMIKVSRGP EDNNVDRWLH
VRARIVQLTV RYQSIDSMRA PLSSSQGFRL RENEQNED
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