| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119486 |
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| Symbol | SmkH |
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| ID | 5000128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | - |
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| Start bp | 423777 |
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| End bp | 425633 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640415549 |
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| Product | Protein Lysyl hydroxylase fusion protein, putative |
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| Protein accession | XP_001416384 |
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| Protein GI | 145343554 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0222202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG GTGACTTTCA CAAAGTTGAC TCGTCTACGA ATTTTCTCCT TCTACAAAAA
AACAGTTCGC GGCAAACTTG CGGAAACTGT TTGCGTCTTT TCGGTAACTG CGACGATGAT
AAGGCAAGTT TCATTAGGTG TGACTGTGGA GATATCTTCT GTAGACGAGA TTGTGCACCG
CATGCGATGC GGGAATTAGG CTGGCATTCA ATTTTATGCT CAAATAGAAG TGAACCAATG
TTGGAATTCT ACGAGTATTG CCGAAGGTCG AGCGAAAGTT TCACTTTTGC TGCTAAGGTG
CTTGCTCAAC TTTTATCAGC AATGTCAGAG TGTGAAACGA GCGTATCAAA AATACAATTG
AGTTGGTCGG AGCAATTCGA TCCGCGTCAT AAGTGGTCCG AACTTGCTGC ACGCGCCAAC
TGGGAGTGTA CGGACTTCTA TGAGTTTGTG CGACGAGCGT GTATTTTAGA ACATCAAATA
GCAGATGCAT GGGACTTATT GAAAGCACAT TTGAATAATA GATTTGATCT AGAGACAAAA
ACACGATTTG CCGAGCTTTT AGACTTTGAG ATGTACGCAG ATATAGTGGC TTCCATTCAG
CGGTTTGCTG TAGCTATTGG TACAGAGAAG ACAACAATTC CACCGACACG CCAATCTCCT
TCCCAAAATG GTGATACTCA TCCTGCATTA GCTCATTACG GCTCAAAGTT TGATATTCAT
CCGAAAGTTT CATACCATTG TGCAATTATG AATAAATTGC CAGATTACTG CGGTTTTTTG
TTGGCACCAA TTCTGACCAA ATTCCAACAC AGCTGCAATC CAAGTGTGCA AGTTGAAGCT
AATTCAACCC TTTCACAGGT GAAATATGGA TATATAGCGC TCAGAGAAAT TGATCAGATG
GAGCCGATCT CTTTGACAAC TATACCTCTT CATTCTAGTG TAAGTGCCAG AGATGCCTCA
CTGTTGAGGC AGCTTGGTAA AGTTTGCGTT TGCTCGCGTT GTTCGTGGGA ACGAGAAGAT
TTTGGTAGAG TTTCGCCCGA ACAAATGAAG CAATTGGCTC TTCAAGCGCA GGAAGAGGGG
CGATACTCAG AGGCAGAGCT CTTATTTCAC TGCACACTTC TTCACAATCC ACACGACACA
GATGTGCTTC ATGCGTATGG TGTGACGCTC CTTAGTCAAG GCAAATGGAA ACTTGCCCAC
AGTATCTGGC AACTCGCTTT TAAGGTTGAC AAAGCTCATC TATGGCTATC GAAACAATTC
AACAAAGATG TTTCATACGC AGCGTATTTA TGTAGAAAAT GTCCCGAATA CTATGTGTCT
TTTCAGACTA TTTCAATTGA TGAAATTTAT TTGACAACAA ATAGTGCAAT ATCACCATCA
GCTTGTTCTA GCTGGATTAA AACCGCCGAA GCTCATGCAA CAAATAGAGG AGGCTGGGAC
ACAGATCGTC ACAAATCTGT AGCCACAACT GATTTGCCTA TACACGAAAT TCCCTCTGTC
TTGCGAGAGT GGAATTTGAT CTTCGGGCAA ATCATAGGTC CCTTCATTCA AGAACGTTTC
AGAGTCGATG GTGACACGAA TCTTAGGGTT CACGATGCAT TCATAGTAAA ATACGATGCC
AGTGATGGAC AGTGTCAGCT ACCAGTACAC ACCGATCAAG GTCACTTCTC CATAACTCTT
TCTCTAAATG ATCCTATACA ATACAAAGGT GGCGGTACGA TTTTCCCGGA GCATGAGTTC
ATTGTTCGAC CAAAGTGTGG AGATTTCGTC GCTTTCAGAA GTTATCTGAC GCACGGTGGC
GTGCCAATCA CATCTGGAGT CAGGTACATA GTCGTGGCTT TTCTCTACTT GAGTTGA
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| Protein sequence | MSKGDFHKVD SSTNFLLLQK NSSRQTCGNC LRLFGNCDDD KASFIRCDCG DIFCRRDCAP
HAMRELGWHS ILCSNRSEPM LEFYEYCRRS SESFTFAAKV LAQLLSAMSE CETSVSKIQL
SWSEQFDPRH KWSELAARAN WECTDFYEFV RRACILEHQI ADAWDLLKAH LNNRFDLETK
TRFAELLDFE MYADIVASIQ RFAVAIGTEK TTIPPTRQSP SQNGDTHPAL AHYGSKFDIH
PKVSYHCAIM NKLPDYCGFL LAPILTKFQH SCNPSVQVEA NSTLSQVKYG YIALREIDQM
EPISLTTIPL HSSVSARDAS LLRQLGKVCV CSRCSWERED FGRVSPEQMK QLALQAQEEG
RYSEAELLFH CTLLHNPHDT DVLHAYGVTL LSQGKWKLAH SIWQLAFKVD KAHLWLSKQF
NKDVSYAAYL CRKCPEYYVS FQTISIDEIY LTTNSAISPS ACSSWIKTAE AHATNRGGWD
TDRHKSVATT DLPIHEIPSV LREWNLIFGQ IIGPFIQERF RVDGDTNLRV HDAFIVKYDA
SDGQCQLPVH TDQGHFSITL SLNDPIQYKG GGTIFPEHEF IVRPKCGDFV AFRSYLTHGG
VPITSGVRYI VVAFLYLS
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