| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1758 |
|---|
| Symbol | |
|---|
| ID | 4416381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1678424 |
|---|
| End bp | 1679563 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639669914 |
|---|
| Product | cystathionine gamma-lyase |
|---|
| Protein accession | YP_811264 |
|---|
| Protein GI | 116491720 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA ATACAAAACT TATTCATGGC GGTATTAGCG AAGATTCATC AACCGGGGCA
GTTTCAATCC CTATCTATCG TTCTTCGACT TTTCATCAAA ACAAGGTCGC TGGAAATGCA
AAGTGGGAAT ACGGGCGCAG TGGAAATCCA ACCCGTGCGG CTTTGGAAAA ACTGATTGCC
GATTTAGAAG AAGGGAAAGC CGGTTTTGCT TTTGCCTCCG GTTCGGCGGC GATTCATGCG
GTTTTTTCAT TGTTCTCTTC CGGTGATCAC ATTGTTGTTG GCGATGATGT TTACGGAGGT
ACTTTCCGTT TGATAGATCA GGTGTTAAAA CGCTTCGGTT TGGAATTTAC TGTTGTTGAT
ACCCGAGATC TGTCCGCGGT TGAAAATGCC ATACAAAAAA ATACCCGGGC AATTTATTTG
GAAACGCCGA CCAATCCCTT ATTGAGAATC ACCGATATTA AAAAAATTGC CGAGATTTCA
AAACACTACC AACTTCACAC AATTGTCGAT AATACCTTTG CGACCCCTTA TAATCAAAAT
CCGTTGGTTT TGGGAGCGGA TATTGTTGTT CATAGCGCAA CGAAATATTT GGCTGGGCAC
AGTGATCTTG TGGCCGGTCT GGCAGTGACC AACGATCCTG AAGTTGCCGA CAAATTAGCT
TTTCTTCAAA ACTCGATTGG TAGTGTTTTA GGTCCTGATG ATAGTTGGTT ATTGCAGCGG
GGGATTAAAA CTTTAGCTGC CAGAATGGAA ATTCATCATA AAAATACTCA GCTTATTTAT
GATTATTTTT CTCGCAATGA CAAGGTCGCG CGGATATATT ATCCTGGTGA TCCTGCTTCT
CAAGGATATG AAATTGCAAA ACGACAAATG TGTGGTTTTG GCGGCATCAT ATCCTTTGAA
CTGGAAAAAG GCTTGGACCC GAAGAAATTT GTTGAGAGTC TGCGGATCAT TGATTTAGCG
GAAAGCTTGG GCGGTGTCGA AAGTTTGATC GAAATTCCGG CCTTGATGAC ACATGCCTCG
ATTCCTCGAG ATATTCGTTT GAAGAACGGT ATTAAAGACG AGCTGATCCG TCTATCGGTT
GGTTTGGAAG ATGGTCAGGA TTTACTGGAC GACTTAAAAC AGTCATTCAG CAAGATTTAG
|
|---|
| Protein sequence | MKFNTKLIHG GISEDSSTGA VSIPIYRSST FHQNKVAGNA KWEYGRSGNP TRAALEKLIA
DLEEGKAGFA FASGSAAIHA VFSLFSSGDH IVVGDDVYGG TFRLIDQVLK RFGLEFTVVD
TRDLSAVENA IQKNTRAIYL ETPTNPLLRI TDIKKIAEIS KHYQLHTIVD NTFATPYNQN
PLVLGADIVV HSATKYLAGH SDLVAGLAVT NDPEVADKLA FLQNSIGSVL GPDDSWLLQR
GIKTLAARME IHHKNTQLIY DYFSRNDKVA RIYYPGDPAS QGYEIAKRQM CGFGGIISFE
LEKGLDPKKF VESLRIIDLA ESLGGVESLI EIPALMTHAS IPRDIRLKNG IKDELIRLSV
GLEDGQDLLD DLKQSFSKI
|
|---|
| |