| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1708 |
|---|
| Symbol | |
|---|
| ID | 4416401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1627067 |
|---|
| End bp | 1627942 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639669869 |
|---|
| Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase |
|---|
| Protein accession | YP_811219 |
|---|
| Protein GI | 116491675 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTACTAG GAAGCATTGA AGCTGGCGGT ACCAAATTTG TTTGTGCCGT CGGCAATGAG
GATTACCGGA CAAAAAATAT TGTTCGTTTT CCAACGACTA CACCAGAAGA AACATTGACA
AAATGTGTCG AATATTTTAA GAAATTTGAC GATGTAAAAG CGATTGGCGT TTCTTCGTTT
GGACCGATTG AATTGCGTCG CAATTCGCCT AAATATGGTT ACATAACAAA TACGCCAAAA
CCCGGTTGGG CCGATGTTGA TTTCGTAGGT CGTTTAAAAA AAGATTTTGA TGTACCAATT
CATTGGACCA CTGATGTTAA TGGTTCGGCT TATGGAGAAT ATGTTATTTC GACTTTATTC
AACGAGCATA TTAATTCTTT GGTTTATTAC ACGATCGGAA CTGGTGTTGG TGCCGGCGCG
ATTGTGAATG GCAAATTTAT CGGTGATCTT GGCCATCCGG AAATGGGGCA TGTACGTTTA
AAGCGTCATC CGGATGATTT GGACTTTCCA GGAATTTGTC CTTTTCACGG CGATTGCCTT
GAGGGACTCG TTTCCGGTCC GACTTTTGAA GCGCGAACCG GTAAAAAAGG TCAAAACGTT
CCACTGACTG ACCATGTTTG GGACATAGTG GCTTATTATG TTGCTCAAGC AGCGATTCAA
GTTACTTTGA CACTTCGCCC GGCAAAGATT GTTTTTGGCG GCGGCGTCGT TAGCGAGGAA
TTTTTGAAAA AGGTTCGTGT CCAGTTTAAA GAGCTGTTAA ATGATTATGT CGATGTTGGA
AAACTGGAAG ATTATATTGT GATGCCGGCA ATCAAGGAGA ACGGATCAGC GACTTTAGGC
GATTTTGCTT TGGCACTTTT GGAATATCGT AAATAA
|
|---|
| Protein sequence | MLLGSIEAGG TKFVCAVGNE DYRTKNIVRF PTTTPEETLT KCVEYFKKFD DVKAIGVSSF
GPIELRRNSP KYGYITNTPK PGWADVDFVG RLKKDFDVPI HWTTDVNGSA YGEYVISTLF
NEHINSLVYY TIGTGVGAGA IVNGKFIGDL GHPEMGHVRL KRHPDDLDFP GICPFHGDCL
EGLVSGPTFE ARTGKKGQNV PLTDHVWDIV AYYVAQAAIQ VTLTLRPAKI VFGGGVVSEE
FLKKVRVQFK ELLNDYVDVG KLEDYIVMPA IKENGSATLG DFALALLEYR K
|
|---|
| |