| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1389 |
|---|
| Symbol | |
|---|
| ID | 4415495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1301273 |
|---|
| End bp | 1302124 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639669564 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_810916 |
|---|
| Protein GI | 116491372 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGATTTA ACGGAAAGAA AATTTTAATT ACTATAATTT CAGTCGTTGT AGCTGTCAGC
TTGATTATTG GGTCAAGTCT TTTTTATGGC AAGGCGAAAG AAATACCGGT TGTCCAGCGC
TTTGTTTCAG ATGTAGGGGC TTTTTTTGGT CGCGGTGTTT CGGCACCAAC TAGTGCCTTA
GGAAAATCGA CCAATTCATT GACGCAACTG TTTAAAACAT ACAAAGAGAA TCAGCGTCTT
GTTAAGCGTG TGGATCAGAT TGCTGCTGAT CAAGTGAAAA TTCAGACGTT AAAAAAAGAA
AATAAGGAAC TCAAGGCTAA TTTAAAACTG AAAGATTCTT TAACCGACTA CAGTACTTCC
AGCGCGGTCG TTGTTAGTCG AACTCCCAGC AGTTGGAATG GACAATTGAT TATTAACAAG
GGTTCGAATG CCGGTGTAAA AAAGAATTCG CCGATTTTGG ATTCCAAAGG TTTGATCGGT
AAAGTAACCC AGGTTTCCGA TACGAGCAGT AAAGTTACAC TTATTTCGAA TGTCGATTCT
GATTCTGATC GTTTTCCTGT TCAGGTCACC AGTGGTGGAA AAGTTGTTAA TGGGATTATC
TCAGGATACG ACTCTGATAC GGATGAACTT GTTCTTGATG AATTAACTTC AAAATCTACA
GTTAAAAAAG GGAGCCTTGT CCAAACTTCC GGACTTGGAG GAATTTTGCC AAAGGGACTT
TACGTTGGTA AAGTTGTTAG TGTTCGTGAC GATACTTACG GTATTGCCAA AGAAATTTAC
ATAAAACCAG CCGCAAATCT ATCGGATATT TCCAGTGTGC TTGTAGTAAC CGGAGTTGGC
GGTAATGAAT AA
|
|---|
| Protein sequence | MRFNGKKILI TIISVVVAVS LIIGSSLFYG KAKEIPVVQR FVSDVGAFFG RGVSAPTSAL
GKSTNSLTQL FKTYKENQRL VKRVDQIAAD QVKIQTLKKE NKELKANLKL KDSLTDYSTS
SAVVVSRTPS SWNGQLIINK GSNAGVKKNS PILDSKGLIG KVTQVSDTSS KVTLISNVDS
DSDRFPVQVT SGGKVVNGII SGYDSDTDEL VLDELTSKST VKKGSLVQTS GLGGILPKGL
YVGKVVSVRD DTYGIAKEIY IKPAANLSDI SSVLVVTGVG GNE
|
|---|
| |