| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1381 |
|---|
| Symbol | |
|---|
| ID | 4415487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1293267 |
|---|
| End bp | 1293920 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639669556 |
|---|
| Product | hemolysin III-like protein |
|---|
| Protein accession | YP_810908 |
|---|
| Protein GI | 116491364 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.438791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTA AAAAGCATAG TGTAAAAACC TTTGGTATCG TTGAAGAAAT TTTTAATTCG
ATTACTCATG GTCTCGGCTT TGCTGCCGCA ATCATTGGAA TTATTTTTCT TTTTATTCGA
GCTGCAGACA CAGGCTATAC TTCGGCGATC GACCTAACGG CCTTGATTAT TTATTCAGTC
TGTCTGATTA TCTTTCTTTT AAATTCCACT CTTTTTCATG CTTTGATCTT TACCCGTTGT
GCTTGGATCT TCCAACATTT TGACCATTTA GGGATTTTCT TAATAATTTT GGCAACCTAT
ACCCCTTTTT GTTGGATTTT CATTAAAAAC CCGATTGCTT TGTGGATATG GGTTGCCAAC
CTTATCTTGG CGATCGGAGG AATTGTTTAC GATTTCATGT TTATCGGCAG GTATCGCTGG
ATTTCGGTTT TGATCTATTT GGCAATGGGT TGGTTAATTG TTTTTCTATT TCCGATTGTT
AAAGACAGTA TTCCGACTAG TTCACTTTGG ATGCTGTTTT GGGGCGGAAT TTCTTATTCG
GCGGGAACTT TTTTTTATTT GAATACAAGA ATTTGGTGGA ACCATGTCTG GTGGCATTTG
TTTGTTCTTC TCGGGACGGC TTTAATGTAT TCTTCAATCT ATCTGACAAT GTAA
|
|---|
| Protein sequence | MDSKKHSVKT FGIVEEIFNS ITHGLGFAAA IIGIIFLFIR AADTGYTSAI DLTALIIYSV
CLIIFLLNST LFHALIFTRC AWIFQHFDHL GIFLIILATY TPFCWIFIKN PIALWIWVAN
LILAIGGIVY DFMFIGRYRW ISVLIYLAMG WLIVFLFPIV KDSIPTSSLW MLFWGGISYS
AGTFFYLNTR IWWNHVWWHL FVLLGTALMY SSIYLTM
|
|---|
| |