| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1006 |
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| Symbol | |
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| ID | 4415678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 940900 |
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| End bp | 941613 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639669207 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_810580 |
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| Protein GI | 116491036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAAT TAGAAAGACT GCAAAAAAGA ATTGCTCAAG CAGGAGTGGC TTCCAGAAGA
AAAGCCGAGG AGATGATTGT TAACGGGCAG GTAAAAGTGA ATGGCAAAAT AATCACAAAA
CTTGGAAAGA AAGTTTCTTC CGACGACATT GTTTATGTTG ATAATAAGAA AATAAATGAA
GAGAGTTTTG AATATTATCT TTTAAATAAA CCGGCCGGAT ATGTTTCGTC CAACAGAAGT
TATCCGAATC AGCCCAGCGT TATAGAACTA ATTAAAACGA AAACGAGAAT TTTTTCGGTT
GGCCGGTTAG ATCAAGATAC GACCGGTGTT TTGTTACTAA CCAACGATGG TGAATTAACT
CAAAAATTGA CTCATCCGAA ACACCGAATT AAAAGAACTT ATGCTGCTTG GGTTAAAGGG
ATTGTTAACG AAGACGAAAT TGAACAATTG ACTAAGCCGA TTCGTTTCGA TGGAGAAATT
TATTTTCCAC AGGCGGCTCG AATTTTGAAA GTTGATCAAA AACGTCAAGA AAGTCTAATT
GAAATCACAA TCGCCGAAGG AAAAAACCAT GAAATCAAAA AAATCCTAGA TTTTATCGGT
CATCCTGTAA TTAAATTAAA TCGTGACATG TTTGACGGAA TTACAATCGG CAATTTAAAG
AAAGGGCAGC ATCGTGCTCT ATCTGAACAG GAAGTCGAAA AGATAAAAAG ATAG
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| Protein sequence | MAQLERLQKR IAQAGVASRR KAEEMIVNGQ VKVNGKIITK LGKKVSSDDI VYVDNKKINE
ESFEYYLLNK PAGYVSSNRS YPNQPSVIEL IKTKTRIFSV GRLDQDTTGV LLLTNDGELT
QKLTHPKHRI KRTYAAWVKG IVNEDEIEQL TKPIRFDGEI YFPQAARILK VDQKRQESLI
EITIAEGKNH EIKKILDFIG HPVIKLNRDM FDGITIGNLK KGQHRALSEQ EVEKIKR
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