| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0802 |
|---|
| Symbol | rplS |
|---|
| ID | 4415862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 749616 |
|---|
| End bp | 750104 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639669013 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_810393 |
|---|
| Protein GI | 116490849 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACTG ATACAATATT TTTTGGCTAT TTTTTGCCAA TTACTGACAT TGCGCTGTTG
TACCAAGGTA TTGAATATCA ATGTTTTCGT TGGGAGTATA AAATGAAACA GAATCAAGTA
CTAGAAAAAT TGACGCAATC ACAATTACGC TCAGACATTC CCGATTTTCG TCCGGGAGAT
AATGTCAGAG TTTATGCTCG AATCGTTGAG GGTGAACGCG AACGTGTCCA ATTATTTGAA
GGCGTAGTTG TTAAACGCAA GGGATTTGGA ATATCAGCTA GTTATACCGT TAGAAAAGTT
TCTTCCGGTG TTGGCGTTGA ACGTACCTTT CCATTAAATT CTCCACGTGT TGATAAAATC
GAAGTTACTC GTCATGGTCA TGTACGTCGC GCTAAATTGT ATTACTTGCG TGCACTTCGT
GGTAAGGCTG CTCGTATCAA GGAAAGTCTT AATACCAAGG CGACTAATAA GAAAACTCAA
ACAAAGTGA
|
|---|
| Protein sequence | MKTDTIFFGY FLPITDIALL YQGIEYQCFR WEYKMKQNQV LEKLTQSQLR SDIPDFRPGD
NVRVYARIVE GERERVQLFE GVVVKRKGFG ISASYTVRKV SSGVGVERTF PLNSPRVDKI
EVTRHGHVRR AKLYYLRALR GKAARIKESL NTKATNKKTQ TK
|
|---|
| |