Gene OEOE_0602 details

Gene Information

• Locus tag: OEOE_0602
• Symbol: rplP
• ID: 4416688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: +
• Start bp: 577498
• End bp: 577929
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 639668822
• Product: 50S ribosomal protein L16
• Protein accession: YP_810209
• Protein GI: 116490665
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000397194
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGTTC CTAAACGTGT TAAGTACCGT CGTGTTCATC GTGGACACAT GCGCGGTGAA 
GCTAAAGGTG GCCGGACAGT TGCTTTTGGT GATTACGGTT TGCAATCACT TGAAAATAAT 
TGGATTACGA ACCGCCAAAT CGAGGCAGCT CGTATCGCCA TTACCCGTTA TATGAAACGT 
GGTGGTAAAG TCTGGATTAA GATTTTTCCA CAAAAGTCCT ATACATCCAA GGGTGTTGGT 
GTCCGTATGG GTAATGGAAA AGGTGCTCCG GAAGGCTGGG TAGCCCCGAC CAAGCGTGGA 
ACAATTATGT TCGAAGTTGG CGGAGTTTCC GAAGCCGTGG CTAAAGAAGC TTTGCGATTA 
GCTATGCATA AATTGCCAGT TAAGGCAAAA ATTGTTAGCA AAGCCGAAGC AAGTAAGGAG 
GTAAACGCAT AA 

 

Protein sequence

MLVPKRVKYR RVHRGHMRGE AKGGRTVAFG DYGLQSLENN WITNRQIEAA RIAITRYMKR 
GGKVWIKIFP QKSYTSKGVG VRMGNGKGAP EGWVAPTKRG TIMFEVGGVS EAVAKEALRL 
AMHKLPVKAK IVSKAEASKE VNA