| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0431 |
|---|
| Symbol | |
|---|
| ID | 4416571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 418381 |
|---|
| End bp | 418722 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639668664 |
|---|
| Product | nucleic-acid-binding protein implicated in transcription termination |
|---|
| Protein accession | YP_810055 |
|---|
| Protein GI | 116490511 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.219386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA AGAAGCGACA ATTTAAAGCA CGTAAAATAC CGATGCGTAA AGATATAGTC
AGTGGCCAAA TGTTCCCAAA AAAGGATTTG ATTCGAATTG TAAAGACCCC GTCTGGAGAA
TTAGAGTTGG ATCCAACCGG TCGAGCAAAT GGCCGCGGCG CCTATGTCAG CGTTGATGTT
ACACTAGCTA AGAAGGCAAA AATAGAGAAG TCTCTCGATT CTACCTTTGA AATGACTGTT
GCCGATGTTT TTTATGATAA ATTAATTGAT TTTGTCAAGC ACCAACAAGA CAGGAAGGAA
CTTTTCAGCC ACGAACAAAT TATCAAAGCA GAAAATTCTT AA
|
|---|
| Protein sequence | MAKKKRQFKA RKIPMRKDIV SGQMFPKKDL IRIVKTPSGE LELDPTGRAN GRGAYVSVDV
TLAKKAKIEK SLDSTFEMTV ADVFYDKLID FVKHQQDRKE LFSHEQIIKA ENS
|
|---|
| |