| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0380 |
|---|
| Symbol | |
|---|
| ID | 4416444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 370773 |
|---|
| End bp | 371708 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639668618 |
|---|
| Product | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
|---|
| Protein accession | YP_810011 |
|---|
| Protein GI | 116490467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAA ACATCTTGCT TTGGCAGGTT ATTGTATTAA CTTTTTATTC TATGTATCAG
ATTATTGATG ATCTGACTTT TATTTCTTCA TTGGCGCAGC CGGTTTGGGC CGGTTTAATC
ACGGGTGCCG TAATGGGCGA TGTAACCAAG GGACTAATTA TCGGAGGAAG TCTTCAACTA
ACGGTCCTCG GAGTTGGGAC CTTTGGTGGA GCTTCTAAAA TAGACGCGAA TTCAGGGACG
ATTTTAGCAA CGGCTTTTTC GATCAGTTCG GGCATGAATG CTCAAACTGC TGTTGCCGCA
ATTGGTGTTC CGGTTGCTTC TTTGATGATT GAAACGGATG TCTTGGGCAG ATTTACGAAC
ACTTACTTTC AGCATCGTAT AGATCGGACA ATTGAGGAAG AAAATTATCA CGCTTTTGAA
CGGAACTATT TATATGGTGC AATTCCGTGG GCTCTATCAC GTGGTATTCC TGTTTTTATT
GCTTTGCAGT TTGGTGGCGG TCTTGTTACG GAAATTGTTA AGGTTCTCGA TACGAAAATG
GTTTGGTTGA GCAATGGTCT TGCCACAGCC GGAGCTTTGC TTCCGGCGGT CGGATTTGCA
ATTTTACTGC GCTATTTGCC GGTTAAAAAA CATTTTGCAT ATTTGATTTT AGGCTTTACC
TTAACTGCTC TCTTAACTAC GGTCTTTACG AATGTTCAGA ACTTGGGAAC TTCAATGGCA
AAAGTTTCGA GCAGTTTTTC GAATAATTTT ACTGCACTTC CAATGGTTGC CATTTCTCTG
ATTGGTTTTT CATTTGCCTT GAATGCTTAT AAACGCGATG TCGGTAACTT ACCGTCTTCC
ACAGATTCAC AGCAGAATGG ACCTTCACAA CCAGAGCAGA GTGAGCAAAA AAATACTAAA
GATGAGGATG GAGAAATCGA TGGCGACGAA GACTAA
|
|---|
| Protein sequence | MSGNILLWQV IVLTFYSMYQ IIDDLTFISS LAQPVWAGLI TGAVMGDVTK GLIIGGSLQL
TVLGVGTFGG ASKIDANSGT ILATAFSISS GMNAQTAVAA IGVPVASLMI ETDVLGRFTN
TYFQHRIDRT IEEENYHAFE RNYLYGAIPW ALSRGIPVFI ALQFGGGLVT EIVKVLDTKM
VWLSNGLATA GALLPAVGFA ILLRYLPVKK HFAYLILGFT LTALLTTVFT NVQNLGTSMA
KVSSSFSNNF TALPMVAISL IGFSFALNAY KRDVGNLPSS TDSQQNGPSQ PEQSEQKNTK
DEDGEIDGDE D
|
|---|
| |