Gene Nwi_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2385 
Symbol 
ID3674414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2605765 
End bp2606850 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content60% 
IMG OID637713949 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_318991 
Protein GI75676570 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAG GCGGAGCGAC ACGGCGCGTT GCATTGATCA CGGGAGTAAC GGGTCAGGAT 
GGGGCCTACC TCGCGGAATA TCTCCTGGGT CTCGGCTACA TCGTACACGG CATCAAGCGT
CGATCGTCAT CGTTCAATAC CGCGCGTATC GACCATCTTT ACGAAGATCC TCACAAGGGC
GACGTTCGCT TCCTGTTGCA CTACGGCGAC ATGACGGACT CCACGAACCT GATCCGGCTG
ATGCAGCAAA TACGGCCGAC CGAGATCTAT AATCTCGCGG CCCAGAGCCA CGTCGCGGTG
AGCTTCGAAA GTCCGGAATA TACCGCGAAC GCCGACGCCA TCGGCGTCCT GCGATTGCTC
GAGGCCATTC GAATTCTCGG CATGGAGAAA GAAACGCGAT TCTATCAGGC GTCGACGTCG
GAACTCTATG GCCTGGTGCA GGAAGTGCCC CAGAAGGAGA CGACGCCGTT CTATCCGCGC
TCGCCCTATG CCGTGGCCAA GCTCTACGGC TATTGGATCA CGGTCAACTA CCGCGAGGCA
TATGGCATGT ATGCCTCCAA CGGCATTCTG TTCAACCACG AGAGTCCGAT ACGCGGCGAG
ACCTTCGTTA CGCGAAAGGT CACGCGCAGC GTTGCGCGCA TTGAGGCCGG CCTGGAGCAG
TGCCTTTATC TCGGCAACCT GGACGCCAAG CGTGATTGGG GCCACGCCCG CGACTATGTC
GAGGGTATGC ACCTCATACT TCAGGCCGAT GGGCCCGATG ACTTCGTTCT CGCGACCGGG
GAGACGCGCG CGGTACGGGA GTTTGTCGAG ATCGCCTTTC AAGAGGTTGG CCGCCGCATT
GAATGGCGCG GCAAGGGGGT CGAGGAAGTC GGGGTCGATA TCAAGTCCGG CCAGATCGTG
GTCCGGATTG ATCCGCAATA TTTCCGTCCG ACTGAAGTCG ATCTGCTGGT AGGTGATGCA
GCCAAGGCGC GCGAGAACCT GGGGTGGCGG CCGAAGACAA GCTTTGCAAC CCTCGTTCGG
GAGATGGTCG CGGCCGATCT TGCCATTGCG AAACGGGAGG CTGTCGGTGG TCAAAACGCC
GTTTGA
 
Protein sequence
MSAGGATRRV ALITGVTGQD GAYLAEYLLG LGYIVHGIKR RSSSFNTARI DHLYEDPHKG 
DVRFLLHYGD MTDSTNLIRL MQQIRPTEIY NLAAQSHVAV SFESPEYTAN ADAIGVLRLL
EAIRILGMEK ETRFYQASTS ELYGLVQEVP QKETTPFYPR SPYAVAKLYG YWITVNYREA
YGMYASNGIL FNHESPIRGE TFVTRKVTRS VARIEAGLEQ CLYLGNLDAK RDWGHARDYV
EGMHLILQAD GPDDFVLATG ETRAVREFVE IAFQEVGRRI EWRGKGVEEV GVDIKSGQIV
VRIDPQYFRP TEVDLLVGDA AKARENLGWR PKTSFATLVR EMVAADLAIA KREAVGGQNA
V