Gene Nwi_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2089 
Symbol 
ID3674646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2287887 
End bp2288897 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID637713654 
ProductAAA ATPase 
Protein accessionYP_318698 
Protein GI75676277 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.765117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA AGCACCTTCT CGCGCTCCTT AATTCGCACA TTGAGGGCGA CGAGGACCAA 
TTCCTTTCCA TCGCACTCCA ACTCGCCGCC CAAGAGGCCC GTCAAGGTCG AGGGGAAGAG
GCGGAGAAAC TGAAGCGTCT CGTTCAGAAG GCCCGCGATC AACAGCGGGC CGGCAGACCG
GCTGGCGGAC AGACCCCGAT TCCACTGGCT CGGCCCAGAG GCGAATTGCA AGGGCTGGTC
GAAAGCGCCT ATCCGAAGGT CACGCTGGCG AGCATGGTCC TGGCCGATGA TGTTCGCGCC
CGTCTGAACC GTGTGGTCCG TCAGCAGCAG GAGCGCGCCA CCCTGCGCGA GCACGGCCAG
GCGCCATCCA CCCACATGCT TCTGGTTGGT CCGCCGGGCA CCGGCAAGAC GATGACCGCC
TCCGCACTCG CGGGCGAACT GCGGCTTCCG TTGTTCACCG TTCGACTTGA GTCGCTATTC
AGTCGCTTCT TCGGCGAGAC GGCTGGCAAG CTGCGGCTAC TCTTCGACCA GATCGCGCAG
ACACGCGGTG TGTATCTGCT GGACGAGTTC GACGCGATCG GCGCTCGACG CGGAGAGCCT
AACGATGTCG GCGAAATCCG TCGCGTGCTC AATTCCGTGC TGGCTTTCAT GGAGGAGCCG
AACTCGACGG ACAGTCTTGT CTTGGCCGCC ACCAACCATG TCGAGATCCT CGATCAGGCG
CTGGCGCGGC GGTTCGATGA AGTGATCGAA TACACGCTGC CAGATGTCGC AGCGGCGCGC
GCGATCATGG AGGGCCGACT CGGTAAATTC AAGATTGCCT TGAAGTCATG GGCGACACTA
GAGCCTGCCC TCGAAGGACT TAGCCAGGGC GAACTGGTGC GAGCGGCCCA CGCGGTGGTC
AAAGATGCAA TTCTCGAAGG CGCAACGAAG GTGTCGGCCG AGGCGTTGCG CGAAGCGCTC
CACAACCGCC AGACCCTCAA GGGAAAGTTC CGCCGCCAGT CCGGTCGTTA G
 
Protein sequence
MSTKHLLALL NSHIEGDEDQ FLSIALQLAA QEARQGRGEE AEKLKRLVQK ARDQQRAGRP 
AGGQTPIPLA RPRGELQGLV ESAYPKVTLA SMVLADDVRA RLNRVVRQQQ ERATLREHGQ
APSTHMLLVG PPGTGKTMTA SALAGELRLP LFTVRLESLF SRFFGETAGK LRLLFDQIAQ
TRGVYLLDEF DAIGARRGEP NDVGEIRRVL NSVLAFMEEP NSTDSLVLAA TNHVEILDQA
LARRFDEVIE YTLPDVAAAR AIMEGRLGKF KIALKSWATL EPALEGLSQG ELVRAAHAVV
KDAILEGATK VSAEALREAL HNRQTLKGKF RRQSGR