Gene Nwi_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2023 
Symbol 
ID3677093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2214009 
End bp2215817 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content62% 
IMG OID637713587 
Producthypothetical protein 
Protein accessionYP_318634 
Protein GI75676213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.700598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCC TTATTTTGGC CCTCGCCCTC CTCAATCTGC CCATCGCTTC ATCATCCTTC 
GCCGACCAGT CCGGTCCGGT ATTCGTTGAC CAGGGTGCGG CCTGGGACAT GTCCAGCCGA
AGCGATTTCT ACACGCGCGA TCAAGGTTCG CGCCTCATTC CGTGGGCGTG GCTCAAGGCG
CTCAAGCAAG CTGACGGCGC TCCCTTTCTC GCGGACGGTT TGACGCGGTA CGGATACCTG
CCGGCTCTCG ATGCTTCGAC GGAGCTTCCT GTCGGTTTCT ACGCGTCCGG GCCGACCGGC
GCGAAGGTCG TCGGGATGAC CTGCTCCGCC TGTCACACCC GCCAGATCAA GGTCGCGGAC
CGGCAGTATC GCATCGACGG AGGACCGGCT CTCGTCGATT TCCAGGCGTT CCTGAGCGAC
CTCGACAAAG CGATGGCGCG GGCGACGTCC GATGATGCCG CGTTCAAGGC ATTCGCGGCG
TCTGTCCTTC AGACACCCAA GCCCGATAGC GACAAAGTCG CCGCGCTGCG GAGCGACGTG
GATGCATGGT ACGTTCGCTA TCACGCCATT GTCGATCGGT CCCTTCCGAA CCCTGGCTGG
GGATTGGGAC GCCTCGATGC GGTCGGCATG ATCTTCAATC GCGTGACCGG GTTGGGCCTC
GGTCCCGAGC CGACCTTTCT GATCCCGGAG AACATTCACA GAGCCGACGC GCCGGTTCGC
TATCCTTTCC TCTGGAACGC ACCCAAACAG GACAAGACGC AGTGGCCGGG CTTCGCTGAT
AACGGGAGCG ATATTCTCGG GCTGGCTCGG AATGTCGGCG AGGTGATGGG CGTGTTCGGC
AACTTCCAGC CGACGCGCGA CGGCCTGTTC ATCGACTTCC TGAACAACAA CTCCGTGAAT
TTCGACGGGC TGCAGAAGCT TGAGGATCTT GCAAAGAAGA TCGGGCCGCC GAAATGGCCA
TGGTCCGTCG ATGCGAAGCT CGCGGCCAAG GGCAAGACTG TCTTTGAACG GCCGGCTGCT
GACGGCGGCT GCCAGGAATG CCATGGCCAG AAAGCCGGCA AGGAGCGCTT CCCCTTTCAA
AAGACTTGGG CGACGCCAAT TCAGAACGTC GGAACGGACA CGCGTGAGTA CGATATCCTG
GGATGGACGG CTAAATCAGG CGTGCTGAAA GGCGCCTACA TTCCGTTCGC GACCAAGCCT
CTGAAAGAAA CCGACCTCGC GTTCAACATT CTGTCGACCT CGGTGATCGG CACGATCGGA
GAGCATGTCC TGAGCTTTTC GAAAGGCGCC TCTCCAAGCG CTCTCGGCGC CTCTGTTCAG
TCCGAGGCCG CGCCTGGCGC ACCCCAGCCC GTCGACGCCA CTCAACTCCC GGCCGTCTTG
CAGGACTTGC CGGGCGCATT CAGGTTTCCT GAGGCCGCTG CAACTCCTGA AACCCGTCTT
CGACTGGACA TGGGTGCCGG AAGCTCGAAC ACCGATGCCG CGACCCCCGC GCCTCCGAAG
GGCGCGTATG AATCGCGGGT TCTCTACGGC ATCTGGGCGG CCGCGCCGTA CCTGCACAAT
GGTTCGGTCG CGAGCCTCGC CGAACTGCTC AAGCCTGCAA GCCAACGGCA GCAGCGTTTT
GCGATCGGGT CCGACTATGA CGTGGATAAC ATCGGCATTG CCGCCAATCA GACCCAGGCC
GGCAACGTCC GCGAAACGAC CGGTTGTGAT GATCTGAACT CCGGCAACAG CCGTTGCGGC
CACGAGTTCG GGACTAGTCT GCCGGACGCC GACAAGAAAG CGCTCCTCGA ATATCTGAAG
ACGCTTTGA
 
Protein sequence
MRTLILALAL LNLPIASSSF ADQSGPVFVD QGAAWDMSSR SDFYTRDQGS RLIPWAWLKA 
LKQADGAPFL ADGLTRYGYL PALDASTELP VGFYASGPTG AKVVGMTCSA CHTRQIKVAD
RQYRIDGGPA LVDFQAFLSD LDKAMARATS DDAAFKAFAA SVLQTPKPDS DKVAALRSDV
DAWYVRYHAI VDRSLPNPGW GLGRLDAVGM IFNRVTGLGL GPEPTFLIPE NIHRADAPVR
YPFLWNAPKQ DKTQWPGFAD NGSDILGLAR NVGEVMGVFG NFQPTRDGLF IDFLNNNSVN
FDGLQKLEDL AKKIGPPKWP WSVDAKLAAK GKTVFERPAA DGGCQECHGQ KAGKERFPFQ
KTWATPIQNV GTDTREYDIL GWTAKSGVLK GAYIPFATKP LKETDLAFNI LSTSVIGTIG
EHVLSFSKGA SPSALGASVQ SEAAPGAPQP VDATQLPAVL QDLPGAFRFP EAAATPETRL
RLDMGAGSSN TDAATPAPPK GAYESRVLYG IWAAAPYLHN GSVASLAELL KPASQRQQRF
AIGSDYDVDN IGIAANQTQA GNVRETTGCD DLNSGNSRCG HEFGTSLPDA DKKALLEYLK
TL