Gene Nwi_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1845 
SymbolgltA 
ID3674816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2022697 
End bp2023998 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content58% 
IMG OID637713406 
Producttype II citrate synthase 
Protein accessionYP_318457 
Protein GI75676036 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.273477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.198527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAA CGAGCACAAA AAACGCAACG TTGACGGTCG ATGACAAGAG TTACGAGTTT 
CCCGTATTGA GCGGCACGGT CGGGCCTGAT GTCGTCGACA TCGGCAAGCT CTATGCGCAG
ACAGGCATGT TCACTTACGA TCCTGCCTTC ACATCCACCG CCAGTTGCCA ATCCAAGATC
ACCTATATCG ACGGCGACGA AGGCGTGCTC GAATATCGCG GCTACCCGAT CGAGCAGCTC
GCGGAGAAAG GCGACTTCAT CGAGACCTGC TATCTGCTGC TCTACGGTGA ACTGCCCACG
AAGTCGCAGA AGCACGATTT CGAGGAGCGT GTCACGCACC ACACCATGGT TCATGAGCAG
ATGACGCGGT TCTTCCAGAG CTTCCGCCGC GATGCCCATC CCATGGCGGT CATGGTGGCG
GCGGTCGGCG CGCTCGCCGC CTTCTATCAC GACTCAACCG ACATCAACGA TCCCAAGCAG
CGCATGATCG CGTCGATGCG CATGGTCGCG AAAATGCCGA CGCTGGCTGC GATGGCTTAC
AAGTATACGA TCGGCCAGCC GTTCATATAT CCGAAGAACT CCCTGAACTT TGCCGAGAAC
TTCCTTCATA TGTGCTTCGC CGTGCCGTGC GAGGACTATG ACATCAATCC GGTTCTGGCG
GACGCGCTCG ACAAGATCTT CATTCTGCAC GCCGACCACG AACAGAACGC ATCGACATCG
ACCGTGCGCA TCGCCGGTTC CTCAGGCGCC AATCCTTTCG CGTGCATTGC GGCCGGCATC
GCCTGCCTGT GGGGACCCGC GCACGGCGGC GCCAACGAGG CGGCGCTGAA CATGCTTTAC
GAGATCGGGA CGGTAGACAG AATTCCAGAA TTCATCGACA AGGTGAAGGA CAAGAACAGC
GATGTCCGGC TGATGGGTTT CGGACATCGG GTCTACAAGA ACTACGATCC GCGCGCGAAG
ATCATGCAGA ACATGTGTCA CGCGGTGCTC AACGAGACGG GCCACGGCAA TGATCCGATG
CTCAAGGTGG CGCTGGAACT GGAAAAGATC GCTCTGAACG ACGAGTATTT CATCAATCGC
AAGCTGTATC CCAACGTCGA TTTCTATTCG GGCCTCACCC TGAAAGCGAT GGGCTTTCCG
ACCTCGATGT TCACCGTGCT GTTCGCGGTC GCGCGCACTG TGGGCTGGAT CAGCCAGTGG
AGCGAGATGA TCGAGGACCC GCAGCAGAAG ATCGGCCGTC CCCGGCAGCT TTACACAGGC
AAGACCCGGC GCGATTACGT CGACATGGCT CAGCGGGCGT AG
 
Protein sequence
MNATSTKNAT LTVDDKSYEF PVLSGTVGPD VVDIGKLYAQ TGMFTYDPAF TSTASCQSKI 
TYIDGDEGVL EYRGYPIEQL AEKGDFIETC YLLLYGELPT KSQKHDFEER VTHHTMVHEQ
MTRFFQSFRR DAHPMAVMVA AVGALAAFYH DSTDINDPKQ RMIASMRMVA KMPTLAAMAY
KYTIGQPFIY PKNSLNFAEN FLHMCFAVPC EDYDINPVLA DALDKIFILH ADHEQNASTS
TVRIAGSSGA NPFACIAAGI ACLWGPAHGG ANEAALNMLY EIGTVDRIPE FIDKVKDKNS
DVRLMGFGHR VYKNYDPRAK IMQNMCHAVL NETGHGNDPM LKVALELEKI ALNDEYFINR
KLYPNVDFYS GLTLKAMGFP TSMFTVLFAV ARTVGWISQW SEMIEDPQQK IGRPRQLYTG
KTRRDYVDMA QRA