| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1811 |
|---|
| Symbol | |
|---|
| ID | 3677066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1984663 |
|---|
| End bp | 1985433 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637713373 |
|---|
| Product | Sel1 repeat-containing protein |
|---|
| Protein accession | YP_318424 |
|---|
| Protein GI | 75676003 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.585081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.966546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCGTGA GCGCCCCGGC CTTTGCCTTT GATGGCACCG TGACCGGAGA GCAGGAAGCC
GCCGCGGCGC TTCCCGTGGT TTCCGCTCCC CTCGCCGGGG GGGAGGCGCT GAAAAAGGCG
GCGACGCCGA GCGTGTCGTT GACGGCTCTG CAATACGCGG CCGAGGGCGG GCACCCGATC
GCCCAGTGGC GGCTGGGACG TATGTATGCC AAGGGCGACG GCGTCACCCA GGATGATCTG
CGCGCTTTTC AGTACTTCAG TCGAATCGCC AACGCCCATG CGGAGGACAG CCCTTCTGCG
CCGCAGGCCG CCGTCGTGGC TAACGCGTTC GTCGCGCTCG GACGCTATTA TCTGCAAGGG
ATTCCGAATT CGGCCATCAA ACGTGACGCT GAGCGCGCGC GCGAGATGTT TTCCTACGCG
GCTTCCTATT TCGGCAACGC CGATGCGCAA TACGATCTCG CCCGGCTCTA TCTGAAAGGC
ATCGGAGCGC CTCACGACGT CAAGTATGGC GCCCGCTGGC TCGGCCTCGC GGCGCAAAAG
GGCCAGCATC AGGCGCAGGC GATGCTCGGC AGGATGTTGT TTAACGGCGA CCTGTTGCCT
CGGCAGGCGG CGCGCGGCCT GATGTGGCTG ACGCTGGCGC GAGACGCGGC CGCGCCAGAC
GAGACCTGGA TCACCGAGAG CTATAACAAG GCGATCGCGA AGGCCTCGGA GGATGATCGC
GCCATGGCGC TGCAGATGCT GGAGCACTGG GTGCAGGGGC GGCGGGATTG A
|
|---|
| Protein sequence | MCVSAPAFAF DGTVTGEQEA AAALPVVSAP LAGGEALKKA ATPSVSLTAL QYAAEGGHPI
AQWRLGRMYA KGDGVTQDDL RAFQYFSRIA NAHAEDSPSA PQAAVVANAF VALGRYYLQG
IPNSAIKRDA ERAREMFSYA ASYFGNADAQ YDLARLYLKG IGAPHDVKYG ARWLGLAAQK
GQHQAQAMLG RMLFNGDLLP RQAARGLMWL TLARDAAAPD ETWITESYNK AIAKASEDDR
AMALQMLEHW VQGRRD
|
|---|
| |