Gene Nwi_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1778 
Symbol 
ID3676814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1948912 
End bp1949454 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID637713338 
Producttwin-arginine translocation protein TatB 
Protein accessionYP_318391 
Protein GI75675970 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0260824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.022069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA TCGGGTGGAG TGAACTGCTC GTCATCGGGG TCGTCGCGCT GATCGCGATC 
GGCCCCAAGG AGCTGCCGGG CGTGTTGCGT ACGGTCGGCC AGTGGATGGG CAAGGCGCGC
AGGATGGCGG CTGAATTTCA GGGGCAGTTC AACGAGGCCA TGCGCGAGGC CGAAATGGCC
GACCTGAAAA AATCCTTCGA CGAAGTGCGC GACGCCACCA GCGGCCTGAC CCGTGGCGAC
CTGATGACCC GGCTGACCGA CTCGCTCGGC GAGCCGCCCA GGCTGGAGGA TATCGACAAG
CCTGCTACCG GGGCCGACAA GCCATCCGTG TCTTCCGATG CCGCTTCCGC AAGCGGGTCG
GCTGCGCCGG AAGCAGGGGC TGCTGAAACC TTCACGGCCG ACGCCGGGAC GAACGCCTCC
GGGCCGCTGG CGATCACGCC GCAGGCTCAT CAGGATGCAA CCGCTGTTGA ACCGCCCGAG
GGTGCGCCGG AAATCTCGCG TGAGGGCAGG GACCAGACGG CCAGGGGCGC CAAAGCGTCA
TGA
 
Protein sequence
MFDIGWSELL VIGVVALIAI GPKELPGVLR TVGQWMGKAR RMAAEFQGQF NEAMREAEMA 
DLKKSFDEVR DATSGLTRGD LMTRLTDSLG EPPRLEDIDK PATGADKPSV SSDAASASGS
AAPEAGAAET FTADAGTNAS GPLAITPQAH QDATAVEPPE GAPEISREGR DQTARGAKAS