| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1719 |
|---|
| Symbol | |
|---|
| ID | 3674732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1876376 |
|---|
| End bp | 1877644 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637713277 |
|---|
| Product | cell wall hydrolase/autolysin |
|---|
| Protein accession | YP_318332 |
|---|
| Protein GI | 75675911 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00404494 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.065032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGTGCC GCGCAAATCT GGGAATCGTC TGGCTATGCG CCGCAGCGAT GCTTGCTCCC
GGCGCGGCTT CGTTGGCCGC CGGGAACGAG CCCGCGCGCC CCGAGGTCGC GGTTGATTTT
CCGGTCGCCT CCGCGGTGCG TGTCGCGGGT GATCTGAAAC AGACCCGCTT CGTCCTCGAT
CTCGACAGGA AGATCGATCT TCGCGCTTTT CTGCTGAGCG ATCCTTATCG GGTCGTGATC
GACACTCCCC AGGTCAGTTT CCATCTTGCG CCAAAGGCCG GGGAGGCGGG ACGCGGCCTG
ATCAAGGCGT TTCGCTACGG CCTGGTGATG CCGGGCGGAT CGCGTATCGT TTTCGATCTC
GCAGGACCTG CGAAAATCGG GAAAGCCTAC GTGCTTGACG CCGCGAACGG TCAGCCCTCC
CGTCTCGTCG TCGAACTTGA GGCCGTCGAC CGTGCCGCAT TCAACCGCTT GCTGGCGCGA
TCGAGCAGCC CGGAACCGGC GAAGGATACT GGTCCTCCCG GGCCCGTTGC CGATACGCCT
GGCTCGCCCG GAGTCGCGGA CGGCCGCCTC GTGGTCGTGA TCGATCCAGG CCACGGCGGA
CTCGATAATG GAACCCAGGC GTCAACGGGA GAAAGCGAAA AGGATCTGGT GCTGGCCTTC
GGCACAGCCT TGCGCGATCG CATCGAGCAG GGCGGCAGGT TCCGTGTCGT CATGACCCGG
ACCGACGACA CTTTCATCCC GCTGGCCGAG CGGGTGCGCA TCGCCCGTAA CAATGGCGCT
TCATTATTCG TGTCGATTCA CGCGGACGCC TTGCCGCGCC ACGAAGGCGA TGCGCGGGGC
GCAACGATAT ATACGCTGTC GGACAGGGCC TCGGACCGCG AGGCGGAACG GCTGGCCGAA
GCCGAGAACA AGGCGGACGC CATCGGCGGC GTCGACCTGA CCGAGGAGCC GACCGAGGTG
GCCGATATCC TGATCGACCT TGCGCGGCGG GAAACGCGCA CGTTCTCAAA TCGTTTCGCC
CGGCTGCTGA TGAGTGAGAT GAAAACCTCC GCGCGAATGC ACAAGCACCC GCTGAAGTCG
GCCGGATTCA GAGTGCTTAA AGCTCCCGAT GTGCCGTCGG TGCTGGTCGA ACTGGGTTAC
GTTTCGAATA ATGCGGATCT TCGCCAGATG GCATCCGAAG AGTGGCGTTC AAAGACGGTC
CGGTCGGTGG CTAAGGCCAT CGAGGCGTTC CTTGCAAAAA GGGTCGTATC AGCCGCTCCG
GTGGACTAG
|
|---|
| Protein sequence | MACRANLGIV WLCAAAMLAP GAASLAAGNE PARPEVAVDF PVASAVRVAG DLKQTRFVLD
LDRKIDLRAF LLSDPYRVVI DTPQVSFHLA PKAGEAGRGL IKAFRYGLVM PGGSRIVFDL
AGPAKIGKAY VLDAANGQPS RLVVELEAVD RAAFNRLLAR SSSPEPAKDT GPPGPVADTP
GSPGVADGRL VVVIDPGHGG LDNGTQASTG ESEKDLVLAF GTALRDRIEQ GGRFRVVMTR
TDDTFIPLAE RVRIARNNGA SLFVSIHADA LPRHEGDARG ATIYTLSDRA SDREAERLAE
AENKADAIGG VDLTEEPTEV ADILIDLARR ETRTFSNRFA RLLMSEMKTS ARMHKHPLKS
AGFRVLKAPD VPSVLVELGY VSNNADLRQM ASEEWRSKTV RSVAKAIEAF LAKRVVSAAP
VD
|
|---|
| |