Gene Nwi_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1702 
SymbolpanC 
ID3675725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1857059 
End bp1857910 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID637713260 
Productpantoate--beta-alanine ligase 
Protein accessionYP_318315 
Protein GI75675894 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.238045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCG CTCCCGCTAT CGTTCGCACC CTGCCATCGC TACGCCGCGC CCTGGAGCGC 
CTGCGGGCGC GGCGAGGCAC CATCGCGCTG GTGCCGACCA TGGGCGCACT TCACGAAGGA
CATCTGGCGC TGGTGCGTCA GGCAAAGAGG CGCGCATCGA GGGTTATCGT CTCGATTTTC
GTCAACCCCA CCCAGTTTGC GCCGCATGAA GACTTCGGAT CCTACCCGCG AACCTGGAAG
GCCGATCTGG CCAAACTCGC CGAGGCGAAG ACCGACCTGA TATGGCGTCC CGACGTCAGC
ACGATGTATC CGCGGGACTT CGCGACCCGG ATATCGACTG AAGGACCGGC CATCGCGAGG
CTTGAAGATC ATTTCCGCCC GCACTTTTTC GGCGGCGTCA CGACCGTGGT CGGCAAGCTG
TTCATCCAGT GCCGGCCTGA TGTCGCATTG TTTGGCCAGA AGGATTATCA GCAACTCAAG
GTCGTGACGC GAATGGTGGC CGATCTCGAT CTCGGCGTGA AGATCGTTGG TGTCCCCATC
GTGCGCGAAC CCGACGGGCT CGCGATGTCG TCACGCAACG TCTACCTGTC GAACGAGCAG
CGCGCTCGCG CGCCGACGCT TTATCGCACC CTGAAGGACG CGGCTGGGCG TTTGCGGAAC
GGGGATCATC TCGAAGCCGT CATGGCGGAT GGCGCGAGGA CGATCGAGGA CACTGGCTTC
TCGCTGGATT ATTTCGAGGC CCGCCACGCC GAAACGCTGT CACCGGTCGG CTCGTTAAAG
GATGGCCCGG TCAGGCTCCT GGTCGCAGCT AAGATCGGGG ATACCCGCCT GATCGACAAC
CTCGGCGTTT AA
 
Protein sequence
MPPAPAIVRT LPSLRRALER LRARRGTIAL VPTMGALHEG HLALVRQAKR RASRVIVSIF 
VNPTQFAPHE DFGSYPRTWK ADLAKLAEAK TDLIWRPDVS TMYPRDFATR ISTEGPAIAR
LEDHFRPHFF GGVTTVVGKL FIQCRPDVAL FGQKDYQQLK VVTRMVADLD LGVKIVGVPI
VREPDGLAMS SRNVYLSNEQ RARAPTLYRT LKDAAGRLRN GDHLEAVMAD GARTIEDTGF
SLDYFEARHA ETLSPVGSLK DGPVRLLVAA KIGDTRLIDN LGV