Gene Nwi_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1647 
Symbol 
ID3675292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1790019 
End bp1791341 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content66% 
IMG OID637713205 
Producthomoserine dehydrogenase 
Protein accessionYP_318260 
Protein GI75675839 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAC CACTGAAAGT GGGCATCGCG GGGCTCGGAA CTGTCGGCTC GGCTGTTGTC 
CGCCTGATCG AGCAGCAAAG AGGCGCGCTC ACGGCGCGCT GCGGACGCGG GGTGCGTGTC
GTCGCCGTGG CGGCGCGCTC GAAAACCAGG AAGCGCGACG TCGACTTGAC CGACATCGCA
TGGGCCAGGG ACGCGCTGGC GCTGGCGAAC GATCCCGGCA TCGACTGCTT CGTCGAACTG
ATGGGCGGTT CGGACGATCC GGCGCATTCC GCGATCGAGG CGGCCCTGAA ATCCGGCAAG
TCGGTGGTGA CGGCCAACAA GGCGCTGATC GCCAAGCACG GCCTGCGGCT GGCTTCTCTC
GCCGAGCAGC ACGGCGGTGC ATTGAACTAC GAAGCGGCGG TCGGCGCCGC AATTCCCGTC
ATCAAGACGC TGCGCGAAGG GCTTGCGGGC ACGACGATCA ATCGCGTCTA CGGCATTCTC
AACGGCACCT GCAACTACAT CCTGACGCGG ATGGAGCGGG AGGGCCTGTC GTTCGCCGAA
TGCCTGAAGG ACGCCCAGCG CCTGGGCTAT GCGGAAGCCG ATCCGTCGTT CGATGTCGAC
GGTCACGACA CCGCGCAGAA GCTGTCGATC CTGGCGAGCC TGGCTTTCGG CACGCGCATC
GCGCAGAACG AGGTCTATGT CGAAGGCATT TCCTCGATCG CGCCGGAGGA TCTTCGCGCG
GCCGAGGAGC TCGGCTACCG GGTCAAGCTG CTGGGGGTCG CGGTGCGGAC CTCGAAAGGC
ATCGAGCAGC GGGTGCATCC GACCATGGTG CCGAAGACAT CATCCATCGC ACAGGTCATG
GGCGTCACCA ACGCGGTGAC CATCGACGGC GACGGCATCC CCCCGATCAC GCTTGTCGGA
CCGGGCGCCG GCGGAGCCGC GACGGCGTCC GCCGTGGTCG CGGATATCGC CGACGTCGCG
TCCGGCACCC GCGCGCTGCC GTTCGGCCGG CACTCGACGA AACTGCGTGA GACGAAAAAA
GCGCCGATGG AGCGCCACGA GGGCGGCTAT TACATTCGCC TGATGGCGCG CGATTTCGCC
GGCACCGCCG CGACCATCGC CACGCGGCTC GCCGAACAGA AGATCTCGAT CGAATCCATC
GTGCAGCGTC ATCCCAACGG CAAGCTGGAT ACCGATGAGT CCGACACGCC GATTTCGCCG
GTTCCGGTTC TGCTGATCAC CTATGCAACC AGCGAGGACG CGGTGCATCG GGCGCTCCAT
GCCGTGAGGG CTGACAAGGT CATCACTGGG CGGCCGCAGG TCATTCGCAT CGAGAAGAAC
TGA
 
Protein sequence
MVAPLKVGIA GLGTVGSAVV RLIEQQRGAL TARCGRGVRV VAVAARSKTR KRDVDLTDIA 
WARDALALAN DPGIDCFVEL MGGSDDPAHS AIEAALKSGK SVVTANKALI AKHGLRLASL
AEQHGGALNY EAAVGAAIPV IKTLREGLAG TTINRVYGIL NGTCNYILTR MEREGLSFAE
CLKDAQRLGY AEADPSFDVD GHDTAQKLSI LASLAFGTRI AQNEVYVEGI SSIAPEDLRA
AEELGYRVKL LGVAVRTSKG IEQRVHPTMV PKTSSIAQVM GVTNAVTIDG DGIPPITLVG
PGAGGAATAS AVVADIADVA SGTRALPFGR HSTKLRETKK APMERHEGGY YIRLMARDFA
GTAATIATRL AEQKISIESI VQRHPNGKLD TDESDTPISP VPVLLITYAT SEDAVHRALH
AVRADKVITG RPQVIRIEKN