Gene Nwi_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1616 
Symbol 
ID3675354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1763947 
End bp1765560 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content59% 
IMG OID637713174 
Productphage terminase 
Protein accessionYP_318229 
Protein GI75675808 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.869159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.498871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTC CTGCATGGAT CAACGACGGC AGCGATATTC CCGATCCTTT CGGTTACGGC 
GAGCGCGCGG TGCAATGGCT GCGCCGGCTG AAGCATCCGA AGAATCCGGC GCGCGGTCAC
CCGTTCCAGG TTGACCCGTG GCAGGAACGG ATCATTCGCA AGCTCTATGG TCCGCGCCAT
GAGGATGGAC GGCGAGTGGT GCGCCGGCTT GTTCTACTAC TTCCGCGGGG AAATCGAAAA
ACCAGCCTAT GCGGCGCAAT AACGCTTTTG CATTTGATTG GCCCGGAGAA GCTGCCCGGC
AATTTGGTGG TGTCGGCGGC ATCCGCGCAC GAGCAGGCGA TGGAGTTGTT TAACGAGGTC
GCCATGATCG TCCAACACGA TCGCCGGCTA GAAAAGCACT TGGCGGTTCG CGAATACACG
TCATCGATCA CTTTCAAGGC GCAACGATCG CGCTATATCG CCGTCGCGAG TGACGGCAAG
GTTCAGCACG GCAAGACACC GAACGTCGTC ATCGCCGACG AATTACATGC TTGGGAGGGC
AGGGCAGGTC GGGTGCAATG GGAGGCGTTG GATTCCGCAC TGGTGAAGGT GCCTGACACG
CTCATGATCG TGGCCACCAC GTCGGGCCGG GGACAAGAAA ACCTCGCCTG GAAAACGATC
GATTACGCCA TCAAGGTTCA GAAGGGCGAG ATTGACGACC CGGCCACGTT GCCTGTCGTA
TTCATGGCGG AAGAGGGCGA CGACTGGCGC GACGAAGCGG TGTGGCACGC TCTGAACCCC
GGTATGCGCC ATGGATATCC GGACCTGACC AGCTACCGCG ACAAGGCGCA GAAGGCGATC
AATTCGCCGT CAGATCGCGA CAGCTTCCTG CAATTCAATT TGAACCGTTG GCTTGACCAC
TCGACATCGC CGTTCGTGGA AATGTTAGTT TACGATCAGG GCGCTCGCGC GATTGATCTC
GATGAACTCA AGGGCGAGCA ATGCTGGATA GGCGTAGACC TTTCCAGCAA CTCGGATTTG
ACGGCCGTCG TGGCGTGCTG GCGAGATGGC GATGACGGAT ACCAGGTTCA GCCATGGTTC
TTCTGTCCGG AAGACAATCT GCGGCGCCGC GCGGACAAGG ATGGTGTCGC TTACCCCGCT
TGGGCCGATG ACGGATTCAT CATTCCGACA CCGGGCAACG TCGTCGATTT TCACGCCGTC
GAGAACCACA TTCGCGACCT TTGCGAGCGG TTCAACGTCC GCGAAATCGC ATTCGATCCG
CATCTGGCGC GCAACATGCT CAGCAATCTA CTGGCGGATG GCCTTCCTGC CGTTGAGATG
CGTCAAGGCT GGGTGACGAT GGCGCCTGCC ATCAAAGAAC TGGAACGGGC GATCGTCGGT
CGCCGCTTCC GTCATGGCGG ACACCCCGTG CTGCGCTGGA ACTTTGATAA CATCGCCACC
GAAACCGACA AGGCCGGCAA CAAATCATTC CACAAGGGAA AGTCTCGCGA CCGGATCGAC
GGCGCGGTTG CGACTGCCAT GGCAGTTGCA CGATGCGCAG CCGGCGACAA CGCCCGATCA
ATCTACGATT CACCGAACTG GTCGCCCGAT TGGGCGTTTG TGAAAGCAGG ATAA
 
Protein sequence
MLAPAWINDG SDIPDPFGYG ERAVQWLRRL KHPKNPARGH PFQVDPWQER IIRKLYGPRH 
EDGRRVVRRL VLLLPRGNRK TSLCGAITLL HLIGPEKLPG NLVVSAASAH EQAMELFNEV
AMIVQHDRRL EKHLAVREYT SSITFKAQRS RYIAVASDGK VQHGKTPNVV IADELHAWEG
RAGRVQWEAL DSALVKVPDT LMIVATTSGR GQENLAWKTI DYAIKVQKGE IDDPATLPVV
FMAEEGDDWR DEAVWHALNP GMRHGYPDLT SYRDKAQKAI NSPSDRDSFL QFNLNRWLDH
STSPFVEMLV YDQGARAIDL DELKGEQCWI GVDLSSNSDL TAVVACWRDG DDGYQVQPWF
FCPEDNLRRR ADKDGVAYPA WADDGFIIPT PGNVVDFHAV ENHIRDLCER FNVREIAFDP
HLARNMLSNL LADGLPAVEM RQGWVTMAPA IKELERAIVG RRFRHGGHPV LRWNFDNIAT
ETDKAGNKSF HKGKSRDRID GAVATAMAVA RCAAGDNARS IYDSPNWSPD WAFVKAG