Gene Nwi_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1545 
Symbol 
ID3676373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1691040 
End bp1692806 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content62% 
IMG OID637713100 
Productphage terminase 
Protein accessionYP_318158 
Protein GI75675737 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.512611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTCC TGGCTGGCGA GATCGTGGCG GGTCCGCTTG TGCGCCTCGC ATGCGAGCGG 
CATCAGCGCG ACCGCACTTC TGGTGAGGAG CGCGGCCTGG TGTTCGACGT CCATGCCGCG
CAGCGCGCGA TCGGCTTCTT CCGTGACGTG CTCACAGTTG AGGTCGAGGA GCGCGACGAA
TATGGCGAGG TATCGACCTA TGCGTCGCCG TTCAACCTGC AGCCGTGGCA GGCATTCATC
ATCGGCTCGC TGTTCGGGTG GAAGAACGCG CTCGGTTTCC GGCGTTTCCG CCGCGCCTAT
GTCGAGATCG GAAAGGGCAA CGGCAAGTCG CCGCTTGCCG CCGGCATCGG CCACTACATG
CTGCTCGGCT GCCGCAAGCT GCGCGCCGAG GTCTACTCTG CCGCCACCGA CAAGGATCAG
GCGGCCATTC TGTTCCGTGA CGCGGTTGCG ATGTGGGAAC GATCGCCGGC GTTGCGGCGG
CGCCTGAAGC CGAAGGGCGC GAATCCGGTG TGGGAGCTGC ACACCAGCCG TCCCGGCGTG
AATTCCTACT TCAAGCCGAT CTCGTCCGAC AAAAAGGGCA AGTCCGGCAT TCGCCCGTAT
TGCGCGCTGA TCGACGAAGT GCACGAGCAC CCGGACAATT CCGTCATTGA AATGATGCGC
GCCGGCACCA AGGGCAACCA GGAAGCGTTG CTTTTCGAAA TCACGAACTC TGGTTTCGAC
AAAAAGACGG TCTGCGGGCA AGAACACGAT ATGTCCGTGC GGATCCTCAA GCGCGAATTC
GAGAACGATG CCTGGTTCGC CTTCATTGCT AATCTCGATG AGACCGACGA TCCGTTTGAG
GATGAGAGCT GTTGGCCGAA GGCGAATCCG AACCTCGGCG TTTCGATCCA ACCCGCATTC
ATCCGGGAGC AAGTGCAGGA AGCGCAAGGC ATGCCCTCGA AAGAGGGTCT GGTCCGTCGC
CTGCACTTCT GCCAATGGAC GGAATCGGCG ACATCAGCCA TTCCGCGCAA GGTATGGGAG
GACTGCGAAG GCGATGTCGA TGTCGACAAA CTCACCGCGG ACAACGTGCC GTGCTATGGC
GGCCTCGATC TCTCCCGCGC GCGCGACCTG ACCGCCTTCA CGCTGACATG GCTGCTCGAT
GCGACGAAAG ATCAGTGGCG ATTTGCTTCT AAAACGTGGT TCTGGACGCC GGCCGATACG
CTGAAAGAGC GCGCGAAAAC CGACCGTGCG CCCTATGAGC TATGGGTCCA AAAGAAATTC
ATGGAGGCGG TGCCCGGTCC GCGTATCAGG TATTCCTGGG TGGCCGACGC GTTGCAGCAG
CTTGTGGCAA AGTATCATCC GGTGATGATC GGCGCCGACC AGTATGGTCT CGAGCAGCTC
CTGGACGCGC TCGGCGAAAA AGGCGGGACA ATACCGGCCG AAGTCCATCC GCAAGGCTTC
CAGCGCCGCA TCATTGGCGA ACGGGAGGGC GATCGAAACC GCGAGACTGG CGCCGACGAC
ATCGTTTGGT GGATGCCTGA CTCCATCAAC AAGCTTGAGG CTGCCCTGCT CGAGCAGCGC
ATCACCGTCG CCGTGAACCC GGTCATGCGC ATGTGTGCCG GCGGCGTGGT CTACGAGCAG
AACCGCACCG GGCATCGCAT GTTCAACAAG GACAAGGCGA CCACCCGCAT CGACGGAATG
GTGTCGCTGG CCATGTCGAT CGGCGTGGCG ACGTCCATGC GAGACGACTC GTCAATTTAC
AGCAAGCGCG GCGCGCTGGT CCTTTAA
 
Protein sequence
MAVLAGEIVA GPLVRLACER HQRDRTSGEE RGLVFDVHAA QRAIGFFRDV LTVEVEERDE 
YGEVSTYASP FNLQPWQAFI IGSLFGWKNA LGFRRFRRAY VEIGKGNGKS PLAAGIGHYM
LLGCRKLRAE VYSAATDKDQ AAILFRDAVA MWERSPALRR RLKPKGANPV WELHTSRPGV
NSYFKPISSD KKGKSGIRPY CALIDEVHEH PDNSVIEMMR AGTKGNQEAL LFEITNSGFD
KKTVCGQEHD MSVRILKREF ENDAWFAFIA NLDETDDPFE DESCWPKANP NLGVSIQPAF
IREQVQEAQG MPSKEGLVRR LHFCQWTESA TSAIPRKVWE DCEGDVDVDK LTADNVPCYG
GLDLSRARDL TAFTLTWLLD ATKDQWRFAS KTWFWTPADT LKERAKTDRA PYELWVQKKF
MEAVPGPRIR YSWVADALQQ LVAKYHPVMI GADQYGLEQL LDALGEKGGT IPAEVHPQGF
QRRIIGEREG DRNRETGADD IVWWMPDSIN KLEAALLEQR ITVAVNPVMR MCAGGVVYEQ
NRTGHRMFNK DKATTRIDGM VSLAMSIGVA TSMRDDSSIY SKRGALVL