Gene Nwi_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1427 
Symbol 
ID3677169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1553764 
End bp1554231 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID637712979 
Productendoribonuclease L-PSP 
Protein accessionYP_318040 
Protein GI75675619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.426351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAG TGATCGAGCA AAATCTGGCC GCGCAGGGCA TCATCCTGCA TGAACCGGCA 
TCGCCCGTGG CGAATTACGT CGGCTTCGTT CGTACCGGCA ACCTGCTGTT CGTGTCCGGA
CAACTCTGCC TGGACCCGGA GGGTAACCTG ATCGCAAAAG GCAAGCTGGG CGCGGATGTC
ACCGTTGAAG AAGGTAACGC GGCCGCGCGC GGCTGCGCCA TCAATCTGCT GGCACAGGTC
AAGGCCGCGC TCGGCGATCT CGACAAGGTC GCCCGTGTCG TCAGGCTTGG CGGCTTCGTC
AACTCCGCTC CCGATTTCGC CGACGGTCCC AAGGTATTGA ACGGCGCATC GGACCTGATG
GTTGCGGCGT TCGGCGAGAA GGGCCGCCAC TCGCGCAGCA CGGTCGGCGT CGCCGCCCTT
CCCGCGAATG CGGCGGTCGA GATCGAAGGC CTTTTCGAAG TCGCCTGA
 
Protein sequence
MAGVIEQNLA AQGIILHEPA SPVANYVGFV RTGNLLFVSG QLCLDPEGNL IAKGKLGADV 
TVEEGNAAAR GCAINLLAQV KAALGDLDKV ARVVRLGGFV NSAPDFADGP KVLNGASDLM
VAAFGEKGRH SRSTVGVAAL PANAAVEIEG LFEVA