Gene Nwi_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1393 
Symbol 
ID3677031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1518676 
End bp1519515 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID637712944 
Producthypothetical protein 
Protein accessionYP_318006 
Protein GI75675585 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCT TGATCGACGC CATGGTCAGA CTGCCGATCC ACGATCCCGA CAAATTTGCG 
CGACGGCGTA CGTTCAAGGA CTGTTTCAGG ACGGAGCGGC TTATGATGCT CCGGCAAGGA
GCGAGGCGTA ATCAGGTGCA GACGATGCGA AGACATATGA CCCGATGGCT GTTGGCGCTG
GCGCTGCTTG GCATCACGAA CGCCGCGCGC GCGGAGATGG CGGAAGTTGC TCCGGGCGTG
ACCGTCACGA AGAAGACGTT CCAGGCGCGG ATGGATGAAC AGCCGTTCTA CGGTTTCGCG
GAAAAAACGG CCGAACAACA AAAGGCCGAT ACCGACTTTC TGGCGGCGGC GGACAGGAAG
GGCACGCGCG AGGCGGTTTC CGCCGCAGCC ATTGAGCGCG GATGGGGGCA TCTGGATCGC
GGTAACTTTC CGGAAGCGAT CAAACGGTTC AATCAGGCGT GGCTGCTGGC TCCGGAGCGG
AGCGCGATCT ACCAGGGTTT CGCGGTGGTC ACCGCGGCGC GCTTCGGCGA TCTCGATTAT
GCCGAAGAAC TGTTCAAGGT TGCATTGCGG CAGCCGAAGC AGCGGCGAAC GCTGAAAGCT
GATTACGGAC GCCTGCTGCT GAAAGCCAAG CGTCCGGCCG AGGCAAAGAC GATTCTGGAG
GAAGGCGTGC GCGAGGCGCC GGACTTCGCC GACGGGTGGG TCAGCCTTGG GCTTGCACGG
TTGCAGACGG ATGACGCCGC GGGCGCATGC GCGGCCGCGA CCGAAGCCAA CAAGCTCAAG
CTTTCGCGCG GAGCGATGAT CGACCTGTTG TTGCTGAAAA GGCAGGGGGC TTGCCCTTAG
 
Protein sequence
MTGLIDAMVR LPIHDPDKFA RRRTFKDCFR TERLMMLRQG ARRNQVQTMR RHMTRWLLAL 
ALLGITNAAR AEMAEVAPGV TVTKKTFQAR MDEQPFYGFA EKTAEQQKAD TDFLAAADRK
GTREAVSAAA IERGWGHLDR GNFPEAIKRF NQAWLLAPER SAIYQGFAVV TAARFGDLDY
AEELFKVALR QPKQRRTLKA DYGRLLLKAK RPAEAKTILE EGVREAPDFA DGWVSLGLAR
LQTDDAAGAC AAATEANKLK LSRGAMIDLL LLKRQGACP