Gene Nwi_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1356 
Symbol 
ID3675773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1491845 
End bp1492555 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content57% 
IMG OID637712907 
Producthypothetical protein 
Protein accessionYP_317969 
Protein GI75675548 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.073199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.394003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACG GGCCAAAGAA CAGCCTTCTG GCGAGCATAC CGGACACGGA ATGGATCGAA 
GTTCAGAAGC TGTGTGAGTT TGTCAAGCTT CCACTGGATC GCGTGCTGTA CGAGCCGCGC
GGCCCGTTCG ATTATGTGTA CTTTCCCGAA ACGGCGATCA TCTCCAACGT TGCTCCGCTC
AAGGTCGACA AGACAGCCGA GACGTCAACC ACGGGACGGG AGGGCATGAT CAATGTCGGA
GCGATCATGG GTGATGATCA ATCCATGCAT CGCGCCGTCG TCCAGGTGTC CGGTGACAGC
ATCCGAATTG CGTTTCAGGA TTTTCAGGAG TTGCAAGCGC GCCTGCCGGT GTTTCGGCGC
AAGCTCAACG CCTACTCGCG GGCGTTCCTT GCGCAGGTGA TGCAGTCCGT TGCGTGCAAC
GCCAGTCATA CGCTTCTCCA GCGCTGCGCG CGATGGCTGT TGAAGTCTCA CGATCGCGTC
GATGGCGACG AACTTCGACT CACTCAGCAA TTCCTGGCCG AAATGCTCGT GGTCAGTCGC
GTGGCCGTTA ACGCCGAGTT GCAGAAGTTT CAGCAACAGC AGGTTCTCAC ATATAGCCGC
GGCATCATTA CCGTACTGGA CCGTAAACTT TTGGAGCGCA CATCCTGCGA ATGCTACCGC
GCGGTCCGGC GAGAGTACGA CAGGCTGTTG CCCGGCTCTT TCACCAAATA A
 
Protein sequence
MVHGPKNSLL ASIPDTEWIE VQKLCEFVKL PLDRVLYEPR GPFDYVYFPE TAIISNVAPL 
KVDKTAETST TGREGMINVG AIMGDDQSMH RAVVQVSGDS IRIAFQDFQE LQARLPVFRR
KLNAYSRAFL AQVMQSVACN ASHTLLQRCA RWLLKSHDRV DGDELRLTQQ FLAEMLVVSR
VAVNAELQKF QQQQVLTYSR GIITVLDRKL LERTSCECYR AVRREYDRLL PGSFTK