Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1348 |
Symbol | rplJ |
ID | 3677025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1478854 |
End bp | 1479372 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637712899 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_317961 |
Protein GI | 162139847 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.223396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAACGAG CGGCAAAAAA AGAAGCGGTC GAACAGCTCA ACGAGACTTT CAGGACGACG GGCGTCGCGA TCGTTGCTCA TTATTCCGGT CTCACCGTGG CTCAAATGCA GACCCTGCGC AAGCAGATGA AGCAGGCGGG CGCCTCGGTG AAGGTCTCGA AGAACCGTCT CGCCAAGATC GCTCTCGAAG GCACGGACGT CGTTGCCATC GGCTCCCTTT TGAAGGGGCC GACCGTGATC GCGACTTCCA GCGATCCGGT GGCGGCGCCG AAGGTGGCCG TCGAATTCGC CAAGACGAAC GAGAACTTCG TCGTGCTCGG CGGCTCGATG GGCAAAACCG TCCTGGACGT GAACGGGGTG AAGGCTCTCG CCTCGCTGCC GTCACTCGAC GAACTGCGCG GCAAGCTGGT CGGCCTTCTG GTCGCGCCGG CGACCAAGAT CGCCCAGCTC TCGACGGCGC CCGCGGCCAA GCTCGCGCGC GTTGTCCAGG CCTATGCCTC AAAGGACGAA GCGGCGTAG
|
Protein sequence | MERAAKKEAV EQLNETFRTT GVAIVAHYSG LTVAQMQTLR KQMKQAGASV KVSKNRLAKI ALEGTDVVAI GSLLKGPTVI ATSSDPVAAP KVAVEFAKTN ENFVVLGGSM GKTVLDVNGV KALASLPSLD ELRGKLVGLL VAPATKIAQL STAPAAKLAR VVQAYASKDE AA
|
| |