| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1234 |
|---|
| Symbol | |
|---|
| ID | 3674459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1358310 |
|---|
| End bp | 1359053 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637712784 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_317848 |
|---|
| Protein GI | 75675427 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.240493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATAG ATCGACAGAC TCTCCTCTCC ATCGCGAAAT CCGTTCGCTC CGGCGCAAGA
TCCGTGCGAG CGCAGATTTC GCCGATTCAT CCGAAGGGGT ATCCCTTCGT CGGTGGCTTC
GCATTGGCCA CCATCATCCT GTTCTGGATC TGGAGCCCGC TGGGCTGGAT CGGAACGCTG
CTGACAATCT GGTGCGCGCT GTTCTTCCGC AATCCCGCCC GTGTGACGCC AATCCGGGAG
GGGCTTGTCG TCGCGCCGGC AGACGGACGG ATCTCGATGA TCGCACCGGT TGTGCCGCCC
GCCGAACTCG AGCTTGGCGA GCTGCCGATG GTGCGTATTT CGATTTTCAT GAGTGTGTTC
AATTGCCACG TCAATCGCAG CCCGGTTGCG GGGCGGATCG AACGGATCGT CTATCGCCCC
GGCAAGTTCA TCAATGCCGA ACTCGACAAG GCGAGCGAGG ACAACGAGCG TAACGCGCTC
GTCATATCGA CGCCAAACAA TGGCCTGGTT GGCGTGATTC AGATCGCCGG ACTGATCGCG
CGCCGTATCG TGACCTTCGT CCATGACGGG CAGACGGTCG AGACTGGCGA ACGCTTCGGG
CTGATCCGGT TCGGCTCGCG GCTCGACGTC TTCCTTCCGG AGGGAACGCA GGTGCTAGTG
TCCGAGGGAC AGACCACGAT CGCCGGCGAG ACGGTGCTGG CTGATTTTCA GCAGACAGAC
GGGCGGACTT TTCGTAGTAG TTAA
|
|---|
| Protein sequence | MPIDRQTLLS IAKSVRSGAR SVRAQISPIH PKGYPFVGGF ALATIILFWI WSPLGWIGTL
LTIWCALFFR NPARVTPIRE GLVVAPADGR ISMIAPVVPP AELELGELPM VRISIFMSVF
NCHVNRSPVA GRIERIVYRP GKFINAELDK ASEDNERNAL VISTPNNGLV GVIQIAGLIA
RRIVTFVHDG QTVETGERFG LIRFGSRLDV FLPEGTQVLV SEGQTTIAGE TVLADFQQTD
GRTFRSS
|
|---|
| |