Gene Nwi_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1228 
SymbolcysS 
ID3676109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1351226 
End bp1352659 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content59% 
IMG OID637712778 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_317842 
Protein GI75675421 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC GTCTTTACGA CACCCTGACG AGGCGGAAGC GTGCCTTCAC GCCGATCGAT 
CCATCGAACG TGCGGATGTA TGTCTGCGGT CCGACGGTCT ATGACTTTGC CCATATCGGC
AATGCGCGGC CGGTCATCGT GTTCGACGTG CTGTTCCGGC TGCTGCGGCA TCTCTACGGC
GATGATCATG TCACCTACGC CCGCAACATC ACCGACGTCG ATGATAAGAT CAACGACCGC
GCGGCGCGCG ATTTTCCTGA TCTGCCGCTG AACGAGGCGA TCCGCAAGGT CACCGAAAAG
ACCGCCGCGC AGTTTCAGGC CGATGTCGCC GCGCTCGGCT GCCTGCCGCC GACGCACCAG
CCGCGCGCCA CCGAGTTCGT GCTGCCGCGC ACCGACGGCA AGACTGACAT GGTGACGTTT
ATCAAGCAGC TTATCGCGCG CGGCCATGCT TATGAGGCGG GCGGCGAGGT GCTGTTCGAC
GTGCGGTCGA TGCCGGACTA CGGCGCGCTG TCCGGCCGCA GGCTGGATGA GCAAAAGGCC
GGCGCGCGGG TCGCGGTGGA TGCGCATAAA AGAAATCCGG CTGACTTCGT GCTGTGGAAG
CTGTCATCCG AGAACGAACC GGGCTGGGAC AGTCCGTGGG GCAGGGGGCG GCCGGGCTGG
CACATCGAAT GTTCGGCGAT GAGCACGGCC TATCTTGGCG ATGTATTCGA CATCCACGGC
GGTGGCCTCG ACCTGATCTT CCCGCATCAT GAGAACGAGA TCGCGCAGTC GCGCTGCGCC
CACGGCACGC ACGCGATGGC GAATTACTGG ATGCACAACG GCTTCCTGCA GGTCGAAGGC
GAGAAGATGT CGAAGTCACT CGGCAACTTC GTGACGATCA ATGAACTGCT GACGACGGAG
AAATTTGGCG GGCGGAAGTG GCCGGGTGAG GTGTTGCGGC TGAATATGTT GCGCACCCAT
TATCGCCAAC CGATCGATTG GACGATCAAA GCTTTGGAAG AGAGTGAAAC TATTCTCCGT
CGCGTCTGCG GGCGAATAAA ACAGTTTGAG TATGCCCGTC GCGGGATGCC GACGAAAGAG
CGATCGGTTC AATTGAACCT TCCACCAGAA ATATTGGAGG CGCTCGTTGA TGATCTTAAC
ACTCCGCTGA TGCTTTCGAG AATTGGAGAG CTGAGCTACG ATGACGCCTT CGACCATGCG
CTATTATCTA TTGGTATCGA CGTGTTGTCA TACGCCCGTT GGTTGCGTTC ACAAGAACAG
TACGCAAGTT CGAATGTCGA TGAGTTAGTG GTCGCTCGTC TTGAGGCTAG AATGCGAAAA
GATTTCAAGG AATCCGACCG CATCCGGGAC GAACTCGCCG CCATGGGCGT TGTGCTGAAG
GACGGTAAGG ACGCCGACGG CAAGCCGGTG ACGACATGGG AGATCGCGCG ATGA
 
Protein sequence
MDLRLYDTLT RRKRAFTPID PSNVRMYVCG PTVYDFAHIG NARPVIVFDV LFRLLRHLYG 
DDHVTYARNI TDVDDKINDR AARDFPDLPL NEAIRKVTEK TAAQFQADVA ALGCLPPTHQ
PRATEFVLPR TDGKTDMVTF IKQLIARGHA YEAGGEVLFD VRSMPDYGAL SGRRLDEQKA
GARVAVDAHK RNPADFVLWK LSSENEPGWD SPWGRGRPGW HIECSAMSTA YLGDVFDIHG
GGLDLIFPHH ENEIAQSRCA HGTHAMANYW MHNGFLQVEG EKMSKSLGNF VTINELLTTE
KFGGRKWPGE VLRLNMLRTH YRQPIDWTIK ALEESETILR RVCGRIKQFE YARRGMPTKE
RSVQLNLPPE ILEALVDDLN TPLMLSRIGE LSYDDAFDHA LLSIGIDVLS YARWLRSQEQ
YASSNVDELV VARLEARMRK DFKESDRIRD ELAAMGVVLK DGKDADGKPV TTWEIAR