| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1193 |
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| Symbol | |
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| ID | 3674421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1298678 |
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| End bp | 1300663 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637712743 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_317807 |
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| Protein GI | 75675386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.157027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG AGGCCGGGCA TTTCGCGCTG GTGCTGGCGC TCGGGCTCGC GCTGATCCAG
TCCGTGGTTC CGATCATCGG CGCAAGACTG CACGACGGCG CGTTGATGAA CGTGGCGCGC
TCGACCGCGC TGGCGCAATT GCTGTTTGTC GCCGCTTCGT TTTTCGCGCT TGCGACGCTG
TACGTGGTTT CCGATTTCTC GGTCCTCAAC GTCTTCCAGA ATTCCCACTC GCTGAAGCCG
ATGATCTACA AGATCACCGG CGTCTGGGGC AATCACGAAG GCTCCATGCT GTTGTGGGTG
ACGATCCTCG CTTTGTTCGG CGGGCTGGTC GCGGCGTTCG GCAATAATCT TCCGCTGACG
CTGCGCGCCC ATGTGCTGGC GGTGCAGGGC TGGGTCGCGA CCGCGTTCTA CCTGTTCATC
CTGCTGACAT CGAATCCGTT CACGCGGATC GCCAGCCCGC CGATGGAGGG GCGCGATCTC
AATCCTGTGC TGCAGGATAT CGGGCTCGCG GTACACCCGC CGATGCTTTA TCTCGGCTAT
GTCGGCTTCT CCATCGCGTT CTCCTTCGCG GTCGCCGCCC TGATCGAAGG CCGCATCGAC
GCAGCCTGGG CGCGCTGGGT GCGGCCATGG ACGCTGGTGG CGTGGATTTT CCTCACCCTC
GGAATCGCGA TGGGATCGTA CTGGGCCTAT TACGAACTCG GCTGGGGTGG CTGGTGGTTC
TGGGATCCGG TCGAGAACGC CTCGCTGATG CCGTGGCTGG CGGGAACGGC GCTGCTGCAT
TCCTCGGTGG TGATGGAAAA GCGCAACGCG CTGAAAGTAT GGACCATCCT GCTCGCGATC
CTGACGTTCT CGCTGTCGCT GCTCGGCACC TTTTTGGTGC GTTCGGGCGT GCTGACGTCA
GTCCATGCCT TTGCTACCGA CCCGACGCGC GGCGTCTTCA TCCTGCTGAT CCTCTGCACC
TTCATCGGCG GCAGCCTCAC CTTGTTTATC TGGCGTGCGT CCACTCTGAA GCAGGGCGGC
TTGTTCGCGC CGGTCTCGCG CGAAGGCGCG CTCGTGCTCA ACAACCTGTT CCTGACCACG
GCCTGCGCCA CCGTGTTCGT CGGCACGTTG TATCCGCTGG CGCTCGAGGT CATCACCGGC
AACAGGATTT CGGTCGGAGC GCCGTTCTTC AACCTGACGT TCGCGCCCTT GTTCGTCCCG
CTGCTGATCG CGGTGCCGTT CGGCCCGCTG CTGGCGTGGA AGCGCGGTGA TCTGCTCGGT
GCCTCTCAAC GGCTGATCGC CGCCGGGGTC GGCAGCGTGA TCGCCGTGGC CGTGCTGTGG
GCATGGACGC GTGGCGGCAG CACCTTCGCG CCGCTGGCGA TCGGACTGGC GGTGTTCGTG
ATTATCGGCG CTCTCTGTGA TCTCGCCGAG CGCGTCAACC TGTTTCGTGC GTCGCTGCCG
GTTTCCCTGC GCCGCGCGAA AGGATTGCCT CGTTCGGCGT GGGGCACGGT TTTCGCCCAT
GCCGGCCTCG GGGTAGCCTT GATCGGCATC GTCTGCGAAA CCACCTGGAA TACCGAATAC
ATCGCCTCGA TGAAGATCAA CGACGTGGCG CGGGTCGGTG GCTACAGTCT GACGTTCGAG
GGTACGACGC AGCATCAGCG ATCCAACTAT CGCGAAGATA TCGCGCGCTT CACCGTCAGT
CGGGACGGGC AGCCGATCGC GGTCATGATG CCCTCCAAGC GTAACTTCAC GACGCGCGCG
GCTTCGACCA CGGAAGCGGC GCTGCTGACG CGTGGCGCGA GCCAGCTCTA CATCTCGCTC
GGTGAAGCCA CCGCCGATGG GTCGATCGCG GTGCGCATCT ATCACAAGCC TATGGTGTTG
CTGATCTGGT TCGGTCCGGT CCTGATGGCC TTCGGCGGCG TGCTGTCGCT GTCAGACCGG
CGCTTGCGGG TCGGTGCGCC GAAACCGGCG AAGGCCGGCT GGCGCACGCT CCAGCCGGCG
GAGTAA
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| Protein sequence | MIAEAGHFAL VLALGLALIQ SVVPIIGARL HDGALMNVAR STALAQLLFV AASFFALATL
YVVSDFSVLN VFQNSHSLKP MIYKITGVWG NHEGSMLLWV TILALFGGLV AAFGNNLPLT
LRAHVLAVQG WVATAFYLFI LLTSNPFTRI ASPPMEGRDL NPVLQDIGLA VHPPMLYLGY
VGFSIAFSFA VAALIEGRID AAWARWVRPW TLVAWIFLTL GIAMGSYWAY YELGWGGWWF
WDPVENASLM PWLAGTALLH SSVVMEKRNA LKVWTILLAI LTFSLSLLGT FLVRSGVLTS
VHAFATDPTR GVFILLILCT FIGGSLTLFI WRASTLKQGG LFAPVSREGA LVLNNLFLTT
ACATVFVGTL YPLALEVITG NRISVGAPFF NLTFAPLFVP LLIAVPFGPL LAWKRGDLLG
ASQRLIAAGV GSVIAVAVLW AWTRGGSTFA PLAIGLAVFV IIGALCDLAE RVNLFRASLP
VSLRRAKGLP RSAWGTVFAH AGLGVALIGI VCETTWNTEY IASMKINDVA RVGGYSLTFE
GTTQHQRSNY REDIARFTVS RDGQPIAVMM PSKRNFTTRA ASTTEAALLT RGASQLYISL
GEATADGSIA VRIYHKPMVL LIWFGPVLMA FGGVLSLSDR RLRVGAPKPA KAGWRTLQPA
E
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