Gene Nwi_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1024 
Symbol 
ID3674875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1120814 
End bp1121653 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content59% 
IMG OID637712574 
Productuniversal stress protein UspA 
Protein accessionYP_317638 
Protein GI75675217 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTA AGGATGTTCT TCTGACACTG ATGAGCTATC CGGAGCCGAC ACCCGTCTCG 
GTGGCGGACG ATGCGGTTTC GGTAGCCGCC GCCCTCGGTG CTCATCTCGC GGCGATTTCC
TGCGAAGTCC ATCTGGAAGC GCCAGGTAAT TTCCTTGCCA AGGCGATCAT CGACGTACCC
GGCATCGTGG CTCATGAATC GGCAAAGAGC CGAGAAAATG CTCAGGGTCT GCTCGCCGCG
CTCGAAGCGG CGGCTGCTAG GTCCGGTGTG TCGCATGAGG CCATCTTGGA GAAATGCGCG
GCTCACAAGA CCCCGGCGAT GCTGGTCGAG TATGCGCGGC TTCGCGATCT TACGATCATG
CCGGAGCCGG AGGCGTTCGA CCTGTGGTAC GCGGAGGAGA TCATCTTCGA ATCGGGAAGG
CCGACCCTGA TCCTGCCTAC TGTCCCGCTG TCACGTCCTA TCCAGTTTGG CTCCATCGGC
GTGGCCTGGG ATTTCAGCCG TACCGCGACG CGTGCGGTTT CGGACGCGCT TCCCCTTCTT
GAAAAGGCGG AGAAGGTCTG CATCTTTATC GTCAGGAACG AGAAATCCTT TAATTCCCAA
CGTTCTCCTG ATGAACTGGC GGAGAATCTT GCCCGCCACG GTATCGATGC CGTTCTGGAT
GAGGTCGACG CCGATGGCAG GCCGATCGGC GAGGTTTTCA GGGCATACGT GCTTTCGCGT
GGGATCGACC TGCTTGTGAT GGGGGCTTAT GGGCAGTCCA GATGGCGGGA GTTCGTACTT
GGAGGCGCAA CCAGGAGTCT GCTGTCGAAA CCGCCTGTTC CAGTTTTCTT CTCGCGTTGA
 
Protein sequence
MAFKDVLLTL MSYPEPTPVS VADDAVSVAA ALGAHLAAIS CEVHLEAPGN FLAKAIIDVP 
GIVAHESAKS RENAQGLLAA LEAAAARSGV SHEAILEKCA AHKTPAMLVE YARLRDLTIM
PEPEAFDLWY AEEIIFESGR PTLILPTVPL SRPIQFGSIG VAWDFSRTAT RAVSDALPLL
EKAEKVCIFI VRNEKSFNSQ RSPDELAENL ARHGIDAVLD EVDADGRPIG EVFRAYVLSR
GIDLLVMGAY GQSRWREFVL GGATRSLLSK PPVPVFFSR