Gene Nwi_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1011 
Symbol 
ID3677237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1107156 
End bp1107806 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID637712560 
Productcoenzyme A transferase 
Protein accessionYP_317625 
Protein GI75675204 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGA CCCGCGAGCA GATGGCGGCG CGCGCCGCCA AGGAATTGCG CGACGGCTAT 
TACGTCAATC TCGGAATCGG TATCCCGACG CTGGTGTCGA ACTTCATTCC CGACAATATC
GACGTTCAGC TTCAGAGCGA GAACGGCATG CTCGGCATGG GTCCCTTCCC TTATGAAGGC
GAGGAGGATC CCGATCTTAT CAACGCGGGC AAGCAGACCG TCACGGAATT GCCGACCACC
AGTTATTTCT CGTCGGCGGA CTCGTTCGGC ATGGTGCGCG GCGGTCATAT CGACCTCTCG
ATCCTCGGGG CGATGCAGGT GGCGCAGAAT GGCGATCTCG CCAACTGGAT GATCCCCGGC
AAGATGGTCA AGGGAATGGG CGGCGCGATG GATCTCGTCG CCGGCGTCAA GCGTGTCCTC
GTCGTGATGG AGCATTCCGC CAAGGATGCG CCGAAGCTGC TCAAGCGATG CACGCTGCCG
CTGACCGGCG AACGGGTTGT CGATATGGTC GTGACCGATC TTGCGGTGTT CACCATCGAC
AAGCACGGCG ACGGGGGCAT GAGGCTGATC GAACTCGCCG GCGGCGTTAC GCTCGATGAG
GTCAGGGCCA GGACCGAAGC CGAATTCGGC GTCGCGCTGC CGAACGCCTG A
 
Protein sequence
MAWTREQMAA RAAKELRDGY YVNLGIGIPT LVSNFIPDNI DVQLQSENGM LGMGPFPYEG 
EEDPDLINAG KQTVTELPTT SYFSSADSFG MVRGGHIDLS ILGAMQVAQN GDLANWMIPG
KMVKGMGGAM DLVAGVKRVL VVMEHSAKDA PKLLKRCTLP LTGERVVDMV VTDLAVFTID
KHGDGGMRLI ELAGGVTLDE VRARTEAEFG VALPNA