Gene Nwi_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0987 
Symbol 
ID3674855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1081170 
End bp1081754 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID637712536 
Producthypothetical protein 
Protein accessionYP_317601 
Protein GI75675180 
COG category[S] Function unknown 
COG ID[COG5480] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.762572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC CAGACCACCT CCTCTTTCTC ACCCTCTCGC GCCGCGCGAG CATCGCGGGC 
TTCTTGCCTG CCCTCGGCCT CGTTGTCGTC TGCCTGTGGT CCGCGCCCGC TGCCGCGGAC
TTCCGGCTCT GCAACAATAC TTCCAGCCGC GTCGGCATCG CCCTTGGCTA CAAGAGCGCG
GACGGCTGGA CCACCGAGGG CTGGTGGAAT ATCTCATCGC ATGCCTGCGA GACCTTGCTG
CGAGGCACGC TCATCGCACG TTATTATTAT ATTTATGCTC TAGATTACGA CCATGGCGGC
GAATGGTCGG GACAGGCTTT CATGTGTTCA CGCGATAAAG AATTCACAAT CAAAGGCACC
GAGAATTGTC TCGCGCGGGG CTTCGATCGC ACCGGCTTCT TTGAGATCGA TACCGGCGAC
CAGCGCGCAT GGACCGTGCA GCTGACGGAG TCCGGCGAAC ATGGACCGCA GCGCGTACCC
GGAATGCCCG GGCAAGATGG AATTCCGGGC GGGTCCGATT CCACGGGCGG AACGCCTCCC
GGGTCTGGTC TGACGCCAGA CGCGTTGCCC GGGCGCAAGC CATGA
 
Protein sequence
MTKPDHLLFL TLSRRASIAG FLPALGLVVV CLWSAPAAAD FRLCNNTSSR VGIALGYKSA 
DGWTTEGWWN ISSHACETLL RGTLIARYYY IYALDYDHGG EWSGQAFMCS RDKEFTIKGT
ENCLARGFDR TGFFEIDTGD QRAWTVQLTE SGEHGPQRVP GMPGQDGIPG GSDSTGGTPP
GSGLTPDALP GRKP