Gene Nwi_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0984 
Symbol 
ID3674405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1078278 
End bp1078943 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID637712533 
ProductTPR repeat-containing protein 
Protein accessionYP_317598 
Protein GI75675177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.815768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA CAACCTCCTC GGCCGGGCGG CTTTGTCTGC CAATGCTGTT CGTCCTCGCT 
GGGACTCTGG CGCCAACTCT CGTGTCCGCG CAGTCGTCAT CGCGCAGCCC TCCGCAGGCT
ACGCCGCCTG AGGCCACCCA GCCCAGCGAT CCGCCACGGA CGCTGCCGAG AAGTCCGAAA
GAGAGGGGTC GCGGTCTCGA TTTCCTGTTC GGCGCCCTCA AGGCCGCGCC GGATGAGGCG
AGTGCGAGGC ATGTCGAGTC GCGGATCCTG ACGCTTTGGA GCCAAACCTC AAGCGACACG
ATCTCGCTTT TGATGCAACG CGTGAAGACA GCGACGGACG CCAAACAAAG CGACGTCGCG
CTCAAACTGC TTGATGCGGT TTTGAAGCTG CGTCCCGAAT ACATCGAGGG ATGGAGCCGG
CGCGCGACTT TGCACTATGT GCGCAACGAC TATCAGCGTT CGCTAGAGGA TATCGAGCAG
GTGCTGATCC GCGAGCCGCG CCACTTTGGA GCGCTGGCGG GTCTCGGCGT GATCATGCAG
GAGCTTGGCG ATGACAAGCG CGCGCTTGAC GCTTTCCGCA AGGCGCTCGC GGTCAATCCC
CATCTCGAGA GAGTGCGGGA GCTGGTCAAA ACCCTGACTG AAAAAGTCGA AGGCCGCGAT
ATCTGA
 
Protein sequence
MQPTTSSAGR LCLPMLFVLA GTLAPTLVSA QSSSRSPPQA TPPEATQPSD PPRTLPRSPK 
ERGRGLDFLF GALKAAPDEA SARHVESRIL TLWSQTSSDT ISLLMQRVKT ATDAKQSDVA
LKLLDAVLKL RPEYIEGWSR RATLHYVRND YQRSLEDIEQ VLIREPRHFG ALAGLGVIMQ
ELGDDKRALD AFRKALAVNP HLERVRELVK TLTEKVEGRD I