Gene Nwi_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0965 
Symbol 
ID3674982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1061550 
End bp1063091 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content61% 
IMG OID637712514 
Productnitrate reductase, beta subunit 
Protein accessionYP_317579 
Protein GI75675158 
COG category[C] Energy production and conversion 
COG ID[COG1140] Nitrate reductase beta subunit 
TIGRFAM ID[TIGR01660] nitrate reductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.390942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GAGCTCAAGT TTCGATGGTC TTTCACCTGG ACAAGTGCAT CGGTTGCCAC 
ACCTGCAGCA TCGCGTGCAA GAACATCTGG ACCGATCGCA AGGGCACCGA GTACATGTAC
TGGAACAACG TGGAGACCAA GCCGGGTACG GGTTACCCGA CACGTTGGGA AGACCAGACC
AAGTATCGTG GCGGCTGGGT GGTTGACGGT CAGAGGCAGA AGAGCCTTCG GCTTCGGCTG
CAGGGCAAGT GGGGAACGCT GACGAACATC TTCTACAATC CCTATCTGCC GACGCTCGAC
GACTATTTCG AGCCGTGGAC CTACGACTAC CAGAACCTGA TCACTGCGCC TCTGGCTGAC
GAGCAGCCGA CCGCGCGGGC GATTTCGATG GTGACCGGCA AATACATGGA CACGATTGAG
GCGGGTCCGA ACTGGGACGA CGACCTCGGC GGTTCGCAGG TTTACGCCAA CAACGACCCG
AACTTCGACG GCGCCTCCGA CGAGGAAATG CGCCAGATCA ACGAGATCAA CAGCACGGTG
TTCTTCTATC TGCCGCGCAT CTGCAACCAT TGCCTCAATC CGGGATGCGT TGCGGCCTGC
CCGCAGGGCG CGCTCTACAA GCGTGGTGAG GACGGCGTCG TGCTGGTGAG CCAGGAACGC
TGCCGGGCCT GGCGCATGTG TGTCTCGGGC TGCCCCTACA AGAAGACCTA CTTCAACTGG
TCGACCGGCA AGGCCGAGAA GTGCATCCTG TGCTATCCGC GTCTTGAGAG CGGCCAGCCG
CCGGCGTGCT TCCACTCCTG CGTGGGACGC ATCCGCTACA TCGGCCTCGT GCTTTACGAT
GCGGACGCGA TCGAGGAGAC GGCGAAGTCG CCGCAGGATC AGCTGGTGAT GGCCCAGCGC
AACATCATCA AGGATCCGTT CGATCCGGAG ATCATCGCCG CCGCGCGAGC CAACGGGATT
CCGGCTGCGA AAATCCAGGC TGCGCAACAA TCACCGGTCT ACCAGTTCGT GAAGAAGTGG
GGCATCGCGC TACCGCTGCA TCCGGAGTTC CGCACGTTGC CGATGCTGTT CTATGTGCCG
CCGCTGGGGC CGGTTCTGGC CAAGGTGGAG AACGGCGTTT ACAACAACAT CTCTCATGAA
GCGCGGCTCG GACCGTTGAT GAGTTCGCTT GAGCGATCAC GCGTATCGCT TCGCTACATG
GCGAGTCTGC TGTCGGGCGG CAATGAGGAG ATCATCCGCG ACGTCTACAA GAAGCTGGTT
GCGGTGCGCG TCTACATGCG TTCGCGGAAG GTCAAGGACA TTCCGGACGA GGAGGTGCAG
CGGGCGCTGT CGGAAGGCAA GACCACCGCG GCGGAAGTCG AGGCGATCTG GCGTCTGACA
TCGATGCCGA CCTTCGAGGA GCGCTTCGTG GTTCCGCCGA TGGAGCGTGA GACGGCGGTC
GACGCCCTGT TCCCGCAGCT TGATCCGGTC TCTCATAACT ATCCGATCCG CAGAGGCGCG
GTCGGCGTCG GCTTCCACAC CGACCCGGCA AGAGGACCAT AG
 
Protein sequence
MDIRAQVSMV FHLDKCIGCH TCSIACKNIW TDRKGTEYMY WNNVETKPGT GYPTRWEDQT 
KYRGGWVVDG QRQKSLRLRL QGKWGTLTNI FYNPYLPTLD DYFEPWTYDY QNLITAPLAD
EQPTARAISM VTGKYMDTIE AGPNWDDDLG GSQVYANNDP NFDGASDEEM RQINEINSTV
FFYLPRICNH CLNPGCVAAC PQGALYKRGE DGVVLVSQER CRAWRMCVSG CPYKKTYFNW
STGKAEKCIL CYPRLESGQP PACFHSCVGR IRYIGLVLYD ADAIEETAKS PQDQLVMAQR
NIIKDPFDPE IIAAARANGI PAAKIQAAQQ SPVYQFVKKW GIALPLHPEF RTLPMLFYVP
PLGPVLAKVE NGVYNNISHE ARLGPLMSSL ERSRVSLRYM ASLLSGGNEE IIRDVYKKLV
AVRVYMRSRK VKDIPDEEVQ RALSEGKTTA AEVEAIWRLT SMPTFEERFV VPPMERETAV
DALFPQLDPV SHNYPIRRGA VGVGFHTDPA RGP