| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0730 |
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| Symbol | |
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| ID | 3676934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 816327 |
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| End bp | 817706 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637712281 |
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| Product | type IV secretory pathway VirD4 components |
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| Protein accession | YP_317348 |
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| Protein GI | 75674927 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0208837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCC TTGCACGATC CTACGCCCAT ATCCGCCAGG GGATCGAACT CGGCTTCTTT
CGCGGCAGGC CGCTGATCTA TGACGGTACC GAGCCGGTCG CCATCGACGC CCAGGCCGGA
AAAGGCAAGC TCACACGGTT TCTCGGCGTC AATCTGGTGT CGCCGCGCAC GGCGCATCTG
AGCAAGATCA TCACCGATCC GAAGGATGCC GAACTTGCAT GGGTATCGTG GAAAACGCTT
GAGCGGCAAG GCTATCATGT GCGCTTTATC AATGCGGGCA GGCTCTACGG TTATCCTTCC
GAAAGCTATA ATTTCAACAC GCGGCTTCTG GAAATCGCCT CGATCCCAGC GCTGCGAACT
CTGGTGGGGG AGGCCGCGTA CGATGCCGCG AGCTATCTCG TGCCAGTCGA TCCGAACCCC
CATCACAAAT GGATCGGCCA GGGCGTGCGC ACGGCCTTCG CGCTCTACAA CAAGATCACG
GCGCTTTATC CTTCCGAACG TTGGCCCTGC ACGGTTGGCG GGCTTTGGGA TTTCTTCGGG
CGCGCGCCGG ATGAGATTGC GGACGATCTA CTGGTGTGGG CGTCTGATTC CCGCATGGAG
GAAGACTGGG GCATGTGCCG CCTGGTCGCG GGCCTGACCG CTTCGACCGA TCAATGGAAC
GCCTATTCCT CGACGGTGGT GGAGCGGCTG CAAGGTTTCC AGCCGGGATC GGCGGCGCGA
ACCGTGACCG AACGCAACAG CTTCGATCCC GCCGACATGA AACGGGAGAA GACGGCTCTC
TTTATTATTG GGTCGGCCCG CTCGGACACG AGCCGGAATT TCGTGGGTGC GATGGCGGCG
GCGGTCATCG AGCGTTTCGC GGATGCGCAT GGCACGCTGC GGGCGCTGGT CGTCGGCGAA
GAATGGGGGC AACTCTATGT CAGCAACTTC CCTGAAATCC TCACCCTCTA CCGGCAGGGC
GGGATCAATT TCCTCGGCGT CTTCCAGAAC GCTGCAGCCC AGATCGAAAA CCGCTACGGG
CGCGAACTGG CCCGCATCTG GCGCAAGGCG GTCGCGCATA CGCTCTATCG GGGCTTGCCA
GATACCGAAA CGCTCAAAGA CATCGAGCAC CGCTCGGGCC GCACCTCGGT CATGGTGCGC
GGATTCAACG TCAACCAGAA CCAGGTGAAC GGCTCCGGCG ACAATCTCTC CGAACAATCG
AGGCCGCTGC TCCAGGTGGA AGACATCCGC CTTGCGACCG GCGGTGAAAG CGCGCTGCTC
GAATCCCGCG ATCAGGGGTA TTTCACGGTC GATATGCCGA ATTTCTGGGA GCGGCCTGAA
ATGAGCGGGA TGCTGCGCGA TGTACGCGAG AAGCCCGATA AATATGCGTG GCTCGCGTAG
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| Protein sequence | MNGLARSYAH IRQGIELGFF RGRPLIYDGT EPVAIDAQAG KGKLTRFLGV NLVSPRTAHL
SKIITDPKDA ELAWVSWKTL ERQGYHVRFI NAGRLYGYPS ESYNFNTRLL EIASIPALRT
LVGEAAYDAA SYLVPVDPNP HHKWIGQGVR TAFALYNKIT ALYPSERWPC TVGGLWDFFG
RAPDEIADDL LVWASDSRME EDWGMCRLVA GLTASTDQWN AYSSTVVERL QGFQPGSAAR
TVTERNSFDP ADMKREKTAL FIIGSARSDT SRNFVGAMAA AVIERFADAH GTLRALVVGE
EWGQLYVSNF PEILTLYRQG GINFLGVFQN AAAQIENRYG RELARIWRKA VAHTLYRGLP
DTETLKDIEH RSGRTSVMVR GFNVNQNQVN GSGDNLSEQS RPLLQVEDIR LATGGESALL
ESRDQGYFTV DMPNFWERPE MSGMLRDVRE KPDKYAWLA
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