| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0689 |
|---|
| Symbol | |
|---|
| ID | 3676912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 768213 |
|---|
| End bp | 769382 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637712240 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_317307 |
|---|
| Protein GI | 75674886 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.62446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA CCGCAGAAGG GACGGGACAG GTCGCGGCTC CGCCTCCGAT CGCGATGCTT
GCCGAACTCA CCCATCGCTG TCCGCTCGCT TGTCCCTACT GTTCCAACCC TCTGGAACTT
GCACGGGCGA ACGAGGAATT GTCGACGAGC GAGTGGATCG AGACCTTTCG GCAGGCCGCC
GCTCTTGGCG TTCTTCATCT GCATCTGTCC GGTGGAGAGC CGGCCTCGCG GCGCGACCTG
ATCGATCTGA CGAAGGCTGC CGTATCCTTG GGACTCTACA CCAACCTGAT AACGTCCGGC
CTTGGTTTGA CGGAAGCGCG CGTCGACAAG CTCTCGGCCG CGGGACTGGA TCACGTGCAA
CTGTCAATTC AGGGAACGAG AGCGCCCGGC GCCGATCATG TCGCCGGTTA CGACGGTGGC
CATGCGCGCA AAATGGCCGT CGCCGGCTGG CTGCGCAACG CCGGCATTCC ACTGACCCTC
AATGCGGTCT GTCATCGCCG GAACATGGGA GAGATCGAAG ATATCATATC TCTCGCAGTC
GAACTCGGCG CGCGCCGGGT CGAAATCGCG ACGGTCCAAT TCCACGGATG GGCTATGCTC
AATCAGAAGG CTTTGATGCC GACGATGGAT CAGGTCGCCA AGGCTACGAG CATCGTGGAG
ACGATGCGCG CGCGGCTCGA AGGCGCGCTT GTGATCGACT ACATTCCGGC CGATTACTAC
GCGACATATC CGAAGGCTTG CATGGGCGGC TGGGGCCGCG CCGGATTCAA TGTCACGCCT
TCGGGTCGGG TCTTACCATG CCACGCCGCC GAAACCATCA AGCATCTCGC CTTTGATAAC
GTCCGGGCGC GCCCCCTCGG CGAGATCTGG TACAATGGCG GCGCCTTCAA CGCCTTTCGT
GGCGACGGCT GGATGCCGGA GCCTTGCAGA AGCTGCGAGC GCAAGGACAT CGACTTCGGC
GGATGCAGGT GTCAGGCCAT GGCGCTTGCC GGCGATGCTT CCGCGACCGA TCCGGTTTGC
CGCAAGTCGC CGCACCGGAA GGCTGTCGAC CGACGCATCA TCGATAACAC CGAGGTCAAT
GACACTGAGG TCCGTGACAT CGAAGTCAGT GACATCGAGA CGCCGCTCCC GCCGTTCCGC
TATCGCGGAA ACGGGACTCT CCGATCTTGA
|
|---|
| Protein sequence | MTVTAEGTGQ VAAPPPIAML AELTHRCPLA CPYCSNPLEL ARANEELSTS EWIETFRQAA
ALGVLHLHLS GGEPASRRDL IDLTKAAVSL GLYTNLITSG LGLTEARVDK LSAAGLDHVQ
LSIQGTRAPG ADHVAGYDGG HARKMAVAGW LRNAGIPLTL NAVCHRRNMG EIEDIISLAV
ELGARRVEIA TVQFHGWAML NQKALMPTMD QVAKATSIVE TMRARLEGAL VIDYIPADYY
ATYPKACMGG WGRAGFNVTP SGRVLPCHAA ETIKHLAFDN VRARPLGEIW YNGGAFNAFR
GDGWMPEPCR SCERKDIDFG GCRCQAMALA GDASATDPVC RKSPHRKAVD RRIIDNTEVN
DTEVRDIEVS DIETPLPPFR YRGNGTLRS
|
|---|
| |