Gene Nwi_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0559 
Symbol 
ID3676948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp628099 
End bp629112 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID637712104 
ProductHWE histidine kinase 
Protein accessionYP_317178 
Protein GI75674757 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.690554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC GGACCGAAGC CAGGTGGATC GAGGAATTCC GGCGCGGATG GCGGGGCGTG 
TCCGAGCCGC CGGCGGCTTT GGGTTTCGGA CTCGCAGCCG TCTGCCTGAT GCTCGCCACC
GCCTTCCGGT TCGGTATCTC GCTGCTGCAC GCGGACGTGC CCTACGGCGC ATATCTTCCC
GGGGTATTTG CCGCGGCCGC GTTCGGCGGA GAGCGGGCTG GAATTGCCGC CGCGATTGGC
GGCGCAGCTC TCGGGCTGAT GCTGAATTTC GGCGAGGCGC CACAAGCCGT CGCCGCGGCG
ATACTCATGG CGGTCTATTT CACCGTCGCC GCGCTCATCA TCCTCGGGGT GCGGCGCCAT
CGTTCGCTGG TCGTGCATCA CCGCGAACTT ACGACCGAAC TCGAGAAGGA GCAGCACTAT
CGCGAACTTG TGGTGGAGGA GCTTCGCCAC CGTCTCAAGA ACAAGCTCGC CACCGTCCAC
GCCGTGACCA AACAGGCGCT TCACAATTAT CCGGAGGCCA GGACCAAGAT CGACGGCTGC
ATCAACGCAC TCGCGACAAC CGATGACCTG ATCGCGCGCA CCGACGACCG TGGCTGTGAC
ATCCTCGAGC TGCTGCGGTC AGAGCTTGGC CCCTACGGCC ATGTCCGGTT CACGCTGAAC
GGCGATTCCC TCTTTCTGCC GGCGAAGCTC GCGGTGAGTC TGGCGCTGAT GTTTCACGAA
CTCGCCACCA ACGCCGCCAA ATATGGTGCG TTCTCCACCC CGCATGGCCT GCTCAACGTT
TCCTGGACCG TAACAAACGG CACGCTCTCA ATCGTCTGGG ACGAATCGGG CGGACCGATG
ATTACGGCGC AGGGCAAGCC GGGATTTGGA ACGCAACTCC TGAATGCCGG CCTGCGGGGA
TTCGGCGGGA AGGCGGAGAT CGCATTCCTC GGCACCGGGC TGCACTGCAT CATGCAATGC
CGGATCGATC CGCCGCCGGC CGATAAGAAG GCGGAAACTT TATCCGAACC GTAG
 
Protein sequence
MAKRTEARWI EEFRRGWRGV SEPPAALGFG LAAVCLMLAT AFRFGISLLH ADVPYGAYLP 
GVFAAAAFGG ERAGIAAAIG GAALGLMLNF GEAPQAVAAA ILMAVYFTVA ALIILGVRRH
RSLVVHHREL TTELEKEQHY RELVVEELRH RLKNKLATVH AVTKQALHNY PEARTKIDGC
INALATTDDL IARTDDRGCD ILELLRSELG PYGHVRFTLN GDSLFLPAKL AVSLALMFHE
LATNAAKYGA FSTPHGLLNV SWTVTNGTLS IVWDESGGPM ITAQGKPGFG TQLLNAGLRG
FGGKAEIAFL GTGLHCIMQC RIDPPPADKK AETLSEP