Gene Nwi_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0555 
Symbol 
ID3676899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp625010 
End bp625768 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content60% 
IMG OID637712100 
Producttranscriptional regulatory protein 
Protein accessionYP_317174 
Protein GI75674753 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0885845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATAC AGCAGGACAC GAACCGTCAG AGCCGACCGT ACAACAACCT TCTGCGTCGG 
CTTAGCGACG CGGATTTCGC GCTGATCAAG TCCAGCCTTG AAGTCGCCCG CAATGAAGGC
GACGACCTGC TTTACAATCC CGGAGACGAT GTCGAAACCG TCCACTTTCC CTGCGGACCC
AGCCTGGTGT CCTATCTCGT CCCCAACGAG GACGGGCGCG ATGTCGAAAC CATTCTGGTT
GGACGGGAGG GAGCGGTCGG CGGCATCGTC AGCCATGGCC ATCTGCCCGC CTATACACGA
ATTACGGTCA AGGTCGGCGG GCTGTTCGTG CGGTTGCGGG TCGCGAAACT GGAATCCGCG
AAAACAAAAT CATCCACGCT GCAGAACCTT TTCGCGCGTT ATGCCGACTG CATGCTGGCG
CAGGTCTTTC AATCCACTGC CTGCAACGCC ATCCATTCGA TCGAGCAGCG CACGGCCAAG
TGGATCCTTT CGGCGATGGA GCGCACCGGC AGCGAACTCG TGCCACTGAC CCATGAGCAG
TTGTCGACGA TGCTCGGTGT CGGACGCAGC TATGCCAGCC GCGTGATCCA GACCTTCAAG
GCGGAAGGCG TACTGGCGAC CCGGCGAGGC GCCATTGTAG TATGCAACCG GGAGGCCTTG
GCCAGTCGCG CCTGCCTCTG CAACGAGGCC GTGAAAGGTC ATTTCGAAGA GGTTTTGCGT
GGCGTTTACC CGACCGACGC GGCGCAACCT GCAAAGTAG
 
Protein sequence
MAIQQDTNRQ SRPYNNLLRR LSDADFALIK SSLEVARNEG DDLLYNPGDD VETVHFPCGP 
SLVSYLVPNE DGRDVETILV GREGAVGGIV SHGHLPAYTR ITVKVGGLFV RLRVAKLESA
KTKSSTLQNL FARYADCMLA QVFQSTACNA IHSIEQRTAK WILSAMERTG SELVPLTHEQ
LSTMLGVGRS YASRVIQTFK AEGVLATRRG AIVVCNREAL ASRACLCNEA VKGHFEEVLR
GVYPTDAAQP AK