| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0500 |
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| Symbol | |
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| ID | 3675501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 555994 |
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| End bp | 557772 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637712044 |
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| Product | diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_317119 |
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| Protein GI | 75674698 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCCG CCATTTCACC GGCAGTCAAT CCCTCGTCTG GCGCCGATGC GTCACAAACC
ATCAGCGCGC CTGCTGGCCT GCCCCAGGCA ACCCAGGAGC CGCGGGTGTC GGCGATCCTC
ACGGCGCTCG GCCGGGCTGC TTTCGTGTGG GATATCCCGA GCGACGCGAT AAACTGGACC
GAGGGAGCTG CGTCGATCTT CAAGGGCATC GACCCGTTCC TGCTCGCGAC CGGAGCCCGA
TATGGACGCC TGATCGAACC GTCGGGATCG GTCCGCACCA ATATCTTTTC CGCCGCGCCG
ACCACCCGGC GGCGCTTTGA TGAGGGAGTG CCCTATTTCA TCGAGTATGG CGTGCGCGCC
AGCGCCTCCG CGCCGATGCT GTGGATCGAG GAGGCCGGAT GCTGGTTCGC CGACGCCGAT
GGCAAGGTGG TGCGCGTCGA AGGCATCGTG CGGCTTGAGA ATGAGCGGCG CGCGCGCGAC
GAGCAACTGA TCAACCTGTC CCGGAACGAT GCCCTCACCG GCGAGCTTAA TCGCACCTAT
CTGACCGCGG CTCTCGCCGA AGCGATCGAG GAAGCCGCGC GCTACCGCTC GCCGGTCGCC
TTCATGATGG TCGGGATCGA TCACCTCGCG CGCATCAACA ATGCTTTCGG CTTCGATGTC
GCCGACGAGG TGATCAGCGA TGTCGCCAGG CGCATCCGAA GGCGGTTGCG CAGCGGCGAC
ACCCTTGGCC GCTTTTCCGG CAACAGATTC GGGGTGATCC TGAAGAACTG CGGCCTGGAT
GAGGTGAGCA TCGCCGCCGA ACGCCTTCTG GCGGGCATCC GCGAAGAGAT CGTGATGACC
AAATCCGGTC CCGTTTCGGT CACCGCCTCC ATAGGCGCCG TTCTGGCCCC GCGTTATGCG
CAGACTGCCG ATGAAGCGAT CAATCGCGCT CAGGAAATCC TCGAAGTTGC GAAAGGCCGC
CGCTGCGGTT CGCTCGCCGT GTGGCGACCC GATACCGAGC GTGAGGCGCA GCGTCGGATC
AACATCCGGG TGACCGACGA GATCGTCACC GCGCTGAACG AGCGCCGCAT CCTCACCGCT
TTCGAGCGGG TGGTCGACGC GCGCACGCGC GAAGCGGCGT TTTATGAGTG CCTGGTGCGG
ATGCAGCAGC AGAATGGTCA GATCCTGCTC GCGCCCGATG TCGTGCCGGT CGCGGAGAAG
CTTGGCCTGA TCCGTCTGGT CGATCATCGC GTGCTCGAGC TTGTGATCGC CGAGCTGGCG
GAAGCGCCCC ACGTCCAGCT CAGTCTCAAT ATCTCGCCGG AAACCACCAT GGATGTCGAC
TGGTGGGCGG CGATCGAAGC TCTGATGGGT GCGCATCCCG GCGTCGCCGA GCGCCTGATC
GTGGAGATCA CCGAAACCGC GGCGATTCAG GATATCGACG ACGTTCAGCG GTTCGTTACG
CGGTTGAAGA ATCTGGGCAG CCGCATCGCG ATCGACGATT TCGGCGCCGG CTACACCTCG
TTCCGGAACT TGCGCAAGCT CGGCGTGGAC ATCGTCAAGA TCGACGGCGC GTTCGTGCAG
AACCTGGCGC GATCCTCAGA CGACCGGGCC TTCGTGCAGA CGCTGATCGA TCTTGCGCGG
CGACTCGATA TCAGAACGGT CGCCGAGTGG GTTCAGGACG AGCAATCAGC GGCCATGCTG
CGGGACTGGG GCTGCGACTT CATCCAGGGC AGGCTGATCG GCCTTGCTTC GCCATCGCGC
CCGTGGAGCG GTCCGGCGGC CGTTCCGGCA ACGAACTGA
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| Protein sequence | MTSAISPAVN PSSGADASQT ISAPAGLPQA TQEPRVSAIL TALGRAAFVW DIPSDAINWT
EGAASIFKGI DPFLLATGAR YGRLIEPSGS VRTNIFSAAP TTRRRFDEGV PYFIEYGVRA
SASAPMLWIE EAGCWFADAD GKVVRVEGIV RLENERRARD EQLINLSRND ALTGELNRTY
LTAALAEAIE EAARYRSPVA FMMVGIDHLA RINNAFGFDV ADEVISDVAR RIRRRLRSGD
TLGRFSGNRF GVILKNCGLD EVSIAAERLL AGIREEIVMT KSGPVSVTAS IGAVLAPRYA
QTADEAINRA QEILEVAKGR RCGSLAVWRP DTEREAQRRI NIRVTDEIVT ALNERRILTA
FERVVDARTR EAAFYECLVR MQQQNGQILL APDVVPVAEK LGLIRLVDHR VLELVIAELA
EAPHVQLSLN ISPETTMDVD WWAAIEALMG AHPGVAERLI VEITETAAIQ DIDDVQRFVT
RLKNLGSRIA IDDFGAGYTS FRNLRKLGVD IVKIDGAFVQ NLARSSDDRA FVQTLIDLAR
RLDIRTVAEW VQDEQSAAML RDWGCDFIQG RLIGLASPSR PWSGPAAVPA TN
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