Gene Nwi_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0461 
Symbol 
ID3676296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp517624 
End bp518796 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID637712003 
Producthypothetical protein 
Protein accessionYP_317080 
Protein GI75674659 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGATT ATTTCAAGGT CGGAGATGAC GATCCCTCGC GCGTCTTCCG TCCTGGCTGC 
GCCCCTTTTC CGCCGCCCGA CCGATCGAAG GCTCGAACGA TACTTGTGGC CGCTTATATG
TCTCTCATGC GCCCGCAAGA CATCCTGATG CCCGATGCCG CCGGACTATA CTGCAAGCCT
GGCGGCTTCC ACATCGATCC GGTGCGGCCG GTGGACCGCG CGATCGTCAC CCACGGCCAT
TCGGATCATG CCCGGCCCGG ACATGGGGCG GTGCTGGCGA CACCGGAAAC GCTCGACATC
ATGCGGCTGC GCTACGGAGA TGATTTCGCG GGCTCCGCGC AGGCGATTTC CTATGGACAA
GAGATCAGGC TGGGCGATGT CACGATCAGG TTCCACCCGG CGGGCCATGT GCTGGGCTCC
GCGCAGATCG CGGTCACCCA TGGCGGAATC CGCATCGTCA TCTCGGGCGA TTACAAGGAT
GTCGGCGATC CGACCTGCAC GCCGCTCGAG ATCGTGCCAT GTGATGTCTT CATCACCGAG
GCGACTTTCG GGCTGCCGGT GTTCCGTCAT GGCGATGCGG CGTCGGAAAC GGGAAAGCTG
TTGGCGTCGG TCGCGCTGTT TCCGGAACGA GCGCATCTGG TTGGCGCTTA CTCGCTCGGC
AAGGCGCAGC GCGTGATCGC GATGGTTCGC GCGGCCGGAT ACGACGCGCC GATCTATCTG
CACGGCGCGA TGGAGAAGGT GACGCAATAC TATCGGAGCC GCGGCATCGC GCTTGGCGAC
CTGCGTCCGG CCAGGGGTAT GAAGAAAGCC GATTTCGCGG GCACCATCAC CCTGGCTCCG
CCCTCGGCCA CGGCCGATGT CTGGACACGG CGATTTCCTG ATCCGGTGAG AGCTTTCGCC
TCGGGCTGGA TGCGCGTGCG TGCGCGTGCG CGGCAGCGCC GCGTCGAACT GCCGCTGGTC
ATTTCCGATC ATGCCGATTG GAACGGCCTG ACACGCACCA TCGCCGCGAC CGGGGCGGGC
GAGATCTGGG TGACGCACGG CCAGGAGGAT GCGCTCGTGC ATTGGTGCAG GGCGCAAGGT
CTCGCCGCGC GCCCGCTGGC ATTGGTCGGC TATGGCGATG AGGACGGCGA GCAGGATGCG
GCGGCTTTCT CCGGCGGAGA GGACGGCTCG TGA
 
Protein sequence
MGDYFKVGDD DPSRVFRPGC APFPPPDRSK ARTILVAAYM SLMRPQDILM PDAAGLYCKP 
GGFHIDPVRP VDRAIVTHGH SDHARPGHGA VLATPETLDI MRLRYGDDFA GSAQAISYGQ
EIRLGDVTIR FHPAGHVLGS AQIAVTHGGI RIVISGDYKD VGDPTCTPLE IVPCDVFITE
ATFGLPVFRH GDAASETGKL LASVALFPER AHLVGAYSLG KAQRVIAMVR AAGYDAPIYL
HGAMEKVTQY YRSRGIALGD LRPARGMKKA DFAGTITLAP PSATADVWTR RFPDPVRAFA
SGWMRVRARA RQRRVELPLV ISDHADWNGL TRTIAATGAG EIWVTHGQED ALVHWCRAQG
LAARPLALVG YGDEDGEQDA AAFSGGEDGS