Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0436 |
Symbol | |
ID | 3676610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 491004 |
End bp | 491744 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637711976 |
Product | hypothetical protein |
Protein accession | YP_317055 |
Protein GI | 75674634 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00284246 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCGCCA AGCTCAAACC ACGCGACCGG ATACAGACGC CTGTCACGAA CCTTTCGGAG TTCAACACCG AAAGCGACGT GGAGCAGAAG CTCGTCTACC CGTTCCTGGT CCACCCCAGC TTCATGGATA TCCCCTCGGA ATGGGTCCGC ACCAAGGAGT ACATGGAGCC GACCGAGATC GATAAGGGCG CTGGCAAGCG GGTCGGCTAC ATTCCCGATT ATTCGGTCTG GCGCAGCGGC TTTCCCCTTC TGGTCGTCGA GGCGAAGCGC CCCGATGAGC CGATCGAAAA GGCGATCCGG GAGGCCCATC TGTATGCGAA TCGGATCAAT AATCGCTATC CCCCGAACGT TAACCCGATC CGCTACGTGC TCGCCTGCAA CGGTGAGCAG TTTGCCCTGG CGCCATTCGA TAGCGAAACC GAGTTGTTGT ACGCCAAGGC CGTCGATCTC CGGCCGGGTA CCGACATTCT GGCGGCGTTC AAAGCGATCT TGAATAAAGA CGAGTTCGAG AAGCGCGCTC AGGAAATGAA CGTCCATTTC CAGTCGCGGC GATTCACGCG CGTGCCGAGC CTGCTAACCG GCACGCAAGT CACTGAACAA CTCGGCATCA ATCCGTTTGC CCAGGAACTT TTCCCGACTT CGGGCAAGAG GCCGACGAGG CGCCGGACGA CATCATTGAT CGCGGCTATG TCTCGACCGA GGAGCGCAGC GAGTATGGCG CGGTGCTCGA AACCTATCTG A
|
Protein sequence | MIAKLKPRDR IQTPVTNLSE FNTESDVEQK LVYPFLVHPS FMDIPSEWVR TKEYMEPTEI DKGAGKRVGY IPDYSVWRSG FPLLVVEAKR PDEPIEKAIR EAHLYANRIN NRYPPNVNPI RYVLACNGEQ FALAPFDSET ELLYAKAVDL RPGTDILAAF KAILNKDEFE KRAQEMNVHF QSRRFTRVPS LLTGTQVTEQ LGINPFAQEL FPTSGKRPTR RRTTSLIAAM SRPRSAASMA RCSKPI
|
| |