| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0343 |
|---|
| Symbol | |
|---|
| ID | 3674897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 384138 |
|---|
| End bp | 385949 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637711883 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_316962 |
|---|
| Protein GI | 75674541 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.697436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.31273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT CTCCCATAGC CAACATCCGC AACTTCTCCA TCGTCGCCCA TATTGATCAT
GGGAAGTCGA CGCTGGCCGA CCGCCTGATC CAGATGACCG GCGGCCTGAG CGATCGGGAA
ATGGCGGGCA AGGAGCAGGT GCTCGATTCG ATGGACATCG AGCGCGAGCG CGGCATCACG
ATCAAGGCGC AGACGGTGCG TCTGAAGTAC CGCGCCAAGG ACGGCAAGGA CTACGTCTTC
AACCTGATGG ACACGCCCGG TCACGTCGAT TTCGCCTACG AGGTTTCGCG CTCGCTCGCG
GCTTGTGAGG GTTCGCTGCT GGTGGTGGAT GCGAGCCAGG GCGTGGAAGC GCAGACACTC
GCCAACGTCT ACCAGGCGCT CGACAACAAC CATGAGATCG TGCCCGTCCT CAACAAGGTC
GACCTGCCCG CCGCCGAGCC GGACAAGGTG AAACAGCAGA TCGAGGACGT GATCGGAATC
GACGCCTCCG ACGCGGTGAT GATTTCGGCC AAGACCGGCC TTGGCGTGCC CGATGTGCTG
GAAGCCATCG TCACCCGGCT GCCGCCGCCG AAAGGCGACC GCGACGCCAC GCTGAAGGCG
TTGCTGGTCG ATAGCTGGTA CGACGTCTAT CTCGGCGTGG TCGTGCTGAT CCGCGTCATC
GACGGCGCGC TCAGGAAAGG CAGCCGCATC CGCATGATCG GCACGAGCGC GGCTTACGAT
GTCGAGCGCG TCGGCTTCTT CACGCCAAAA ATGCAGCAGG TCGACGAACT CGGCCCCGGC
GAGATCGGCT TCATCACAGC CGCCATCAAG GAAGTCGCGG ACACCCGCGT CGGCGACACC
ATCACCGACG ATCGCAAGCC GGTGACGGAG ATGCTGCCCG GCTTCAAGCC CGCGATTCCC
GTGGTGTTCT GCGGCCTGTT TCCCGTAGAC GCCGACGATT TCGAGACGCT GCGCGCGGCG
ATGGGCAAGC TGCGTCTCAA CGACGCCAGC TTCTCGTTCG AAATGGAAAC CTCCGCCGCG
CTAGGCTTCG GCTTCCGCTG CGGTTTCCTC GGTCTGCTGC ATCTTGAGAT CGTCCAGGAA
CGGCTCTCCC GCGAGTTCGA TCTCAACCTG ATCGCCACCG CTCCGAGCGT CATCTACAGG
ATGAGGCTGA CGGACGGCGT GGAGATCGAG ATCCACAATC CGATCGACAT GCCCGACGTG
GTGAAAATCG CCGAGATCCA GGAGCCGTGG ATCGAGGCCA CCATCCTCAC GCCCGACGAG
TATCTCGGCA GCGTGCTGAA GCTGTGTCAG GACCGCCGCG GCGTGCAGAA GGAACTCACC
TATGTCGGCG CGCGGGCGAT GGCGAAATAC GACCTGCCCC TCAACGAGGT CGTGTTCGAC
TTCTACGACC GGCTCAAGTC CGTCTCCAAG GGCTACGCCT CGTTCGATTA TCATCTCACC
GACTACAAGC CGGCCGATCT CGTGAAGATG CAGATCCTCG TCAACGGCGA GCCGGTCGAT
GCGCTGTCCA TGCTGGTGCA TCGCACCCGC GCCGAAGGCC GCGGCCGCGC CATGGTCGAG
AAGATGAAAG AACTGATCCC GCCGCACATG TTCCAGATTC CGATCCAGGC GGCGATCGGC
GGCAAGGTGA TCGCGCGCGA GACGGTGCGC GCGCTGCGCA AGGATGTCAC CGCGAAGTGC
TACGGCGGCG ATGTCAGCCG CAAGAGAAAG CTTCTGGAGA AGCAGAAGGA AGGCAAGAAG
AAGATGCGGC AGTTCGGCAA GGTCGATATT CCGCAGGAAG CCTTCATCGC CGCCCTGAAG
GTCGATAACT GA
|
|---|
| Protein sequence | MTTSPIANIR NFSIVAHIDH GKSTLADRLI QMTGGLSDRE MAGKEQVLDS MDIERERGIT
IKAQTVRLKY RAKDGKDYVF NLMDTPGHVD FAYEVSRSLA ACEGSLLVVD ASQGVEAQTL
ANVYQALDNN HEIVPVLNKV DLPAAEPDKV KQQIEDVIGI DASDAVMISA KTGLGVPDVL
EAIVTRLPPP KGDRDATLKA LLVDSWYDVY LGVVVLIRVI DGALRKGSRI RMIGTSAAYD
VERVGFFTPK MQQVDELGPG EIGFITAAIK EVADTRVGDT ITDDRKPVTE MLPGFKPAIP
VVFCGLFPVD ADDFETLRAA MGKLRLNDAS FSFEMETSAA LGFGFRCGFL GLLHLEIVQE
RLSREFDLNL IATAPSVIYR MRLTDGVEIE IHNPIDMPDV VKIAEIQEPW IEATILTPDE
YLGSVLKLCQ DRRGVQKELT YVGARAMAKY DLPLNEVVFD FYDRLKSVSK GYASFDYHLT
DYKPADLVKM QILVNGEPVD ALSMLVHRTR AEGRGRAMVE KMKELIPPHM FQIPIQAAIG
GKVIARETVR ALRKDVTAKC YGGDVSRKRK LLEKQKEGKK KMRQFGKVDI PQEAFIAALK
VDN
|
|---|
| |