Gene Nwi_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0190 
Symbol 
ID3676646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp219789 
End bp221012 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID637711728 
Producthypothetical protein 
Protein accessionYP_316810 
Protein GI75674389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.613594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.386647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA AAGACCCCTT CGCCCCAAAA CCTGAGCGTC ACGGCCCCAC GCGGCGAACC 
GCGCTGGGCC TTGTCGTGGG TGCGCCCCTG CTCGGCGCCT GCTCGGGAGT CCAGCAAACA
CTGACCAACG GTTTTTCCAG TCCCCCCGGT TCTTCTCCGC AGCCCGAGTC GACCGCGGGG
CCCCAGCAGG GAGCCACAAT CGGCACCGGC CAGGTCAAGG TCGGCCTGAT CCTACCACTG
TCGGCGGCAG GCAATGCGAG CATTGCGGCG CAGTCGATGC GGAATGCGGC GGAGATGGCG
CTGTCGGAAT TCCAAAATCC GAACGTCCAG GTGCTGGTCA AGGACGCGGC AGGCACGGCG
AGGGGTGCGC AGCAGGGGGC TCAACAGGCG CTCGACGAAG GGGCCGAAAT CATTCTCGGC
CCGCTATTTG CTGCGTCGGT CCCGGGGGTC GCCCAGGTGG CGCGAACCCG CGGTGTTTCG
GTGATCGCGT TTTCAACGGA TTCGAGCATT GCGGGCAGAG GCGTCTATCT TCTGAGTTTT
CTTCCTGAAT CGGACGTCAC CCGGATCGTC GAATACGCGG CGAGCACCGG AAAGCGCTCG
TTTGCCGCGA TGGTGCCCGA GAACGCCTAC GGCAATGTCG TGGAGGCGGC CTTCAAGCAG
ACGGTTGGCC GTCGCGGCGG GCGGATCGCC GCATTCGAGA AATACGGCTC CGATCGCGCC
AGCGCCGCGC GGAACGTTGC ACAGTCGCTC CGCTCGGCCG ACGCGCTGCT GATCGCCGAT
GATGGCGATA CGGTGGTTTC GGTCGCCGCC GCGCTCACGG CGGCGGGCGC GAATCTGCGC
AACGTCCAGC TTCTCGGCAC CGGGCTGTGG GACAATCCTC GCGTGTTCTC CAGCACGACA
CTGCACGGGG GGCTCTATGC CGCTCCAGAT CCGGCGGGCT TCCGCGCCTT CGCAGGCCGC
TACCGCACCA AGTTCGGCGG TGAGCCGGTG CGTACGGCGA CCCTTGCCTA TGATGCGGTC
GCGCTGGTGG CGGCTCTCGC CCGTACTCAG GGATCGCAGC GCTTCGCGGC GGAAACGCTG
ACCAACGCCT CCGGCTTTGC CGGCATCGAC GGCTTGTTTC GATTCCGTTC CGACGGCACC
AATCAGCGCG GCCTCGCCGT CATGCGCGTC GCATCCGGCG GCGGCCAGTC AGTGGCAGGC
TCGCCAAAAA GTTTTGGCGC CTGA
 
Protein sequence
MMMKDPFAPK PERHGPTRRT ALGLVVGAPL LGACSGVQQT LTNGFSSPPG SSPQPESTAG 
PQQGATIGTG QVKVGLILPL SAAGNASIAA QSMRNAAEMA LSEFQNPNVQ VLVKDAAGTA
RGAQQGAQQA LDEGAEIILG PLFAASVPGV AQVARTRGVS VIAFSTDSSI AGRGVYLLSF
LPESDVTRIV EYAASTGKRS FAAMVPENAY GNVVEAAFKQ TVGRRGGRIA AFEKYGSDRA
SAARNVAQSL RSADALLIAD DGDTVVSVAA ALTAAGANLR NVQLLGTGLW DNPRVFSSTT
LHGGLYAAPD PAGFRAFAGR YRTKFGGEPV RTATLAYDAV ALVAALARTQ GSQRFAAETL
TNASGFAGID GLFRFRSDGT NQRGLAVMRV ASGGGQSVAG SPKSFGA