| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0178 |
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| Symbol | |
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| ID | 3676634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 203809 |
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| End bp | 204405 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637711716 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_316798 |
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| Protein GI | 75674377 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.166725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.611545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACTTC GAATTTCGGG CAAGAGCATC AATGTCGGCG AGGCGCTGCG AGGGCGTCTC
AACAGCCGCA CCGACGAAGT CCTCCGGAAA TATTTCGATG GCCAGTATTC GGGCCACATC
ACGCTGAGCA AGGACGGCTT CGGCTTTCGC ACCGACTGCG CGCTGCATCT GGATTCCGGA
GTGACGCTCG AAGCCGAATC GAATGCCGCG GATGCCTATG CCAGCGCCGA CCAGGCGCTG
TTGCAGATCG AAAAGCGGCT GCGCCGCTAC AAGAGCCGTC TCAAGGATCA CTCGGCGCGC
AAGGCGCGCG CAGCCGCGGA AACGATCGCC GGGCTCGACG CGCCGAGCTA CGTGATCGAG
GCGCCGGCGA TGAACGGCGA GGGCGAGGTC ACCGCTTTCA ATCCGGTGAT CATCGCGGAA
ACCATCACCT CGCTGAGGCG GCTCTCGGTC AGCGAAGCGG TGATGGAACT CGATTTCACC
GGCGCGCCCG TATTGGTGTT TCAGCATGGC TCCAGCGGCC GCGTGAACAT GATCTATCGC
AGGCCTGATG GAAACGTGGG CTGGATCGAC CCGCCGGCCG TCAACGGCTC TGCCTGA
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| Protein sequence | MTLRISGKSI NVGEALRGRL NSRTDEVLRK YFDGQYSGHI TLSKDGFGFR TDCALHLDSG
VTLEAESNAA DAYASADQAL LQIEKRLRRY KSRLKDHSAR KARAAAETIA GLDAPSYVIE
APAMNGEGEV TAFNPVIIAE TITSLRRLSV SEAVMELDFT GAPVLVFQHG SSGRVNMIYR
RPDGNVGWID PPAVNGSA
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