Gene Nther_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2880 
Symbol 
ID6315705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3111000 
End bp3111902 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content40% 
IMG OID642645251 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_001919015 
Protein GI188587470 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000112609 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000294886 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAGCAA AATTTTTTCA GGTTGATTCT TTTACAGAGA CATCTTTTGG TGGCAACCCG 
GCAGGGGTAA TTATCTCTGA ACAAGAGTTA CCTCGTGAGA CGATGCAAAA CTTGGCCAAG
GAAGTCAATG CTTCTGAGAC GGCTTTTGTT TTGCCGGGTT TGGAGTTTAG ATTCTTCACT
CCTACAGTAG AAGTTTCCTA CTGTGGACAT GCAACAGTAG CGGCTTTTCA TGCTTTAGTG
ACTTCTGGAT ACCTAACACC AGATCAAGAT GGTACTACCT ATACTCAAAC TACTCAAGAA
GGATCTTTTC CGGTGACTGT TTATCCCAGA GGAAATGGTT CTCCCTTAAT ATGCACTTGG
AAACATGATA AAGATATCGA GATGGGAGAT AAGGTTTCTC CTTATGTATT AGAGGACCTG
TTTTATATTA AAAATTCAGT GAATGCTACT TTTACTAGTG TTAATGAGTT TTGCCCTATG
GATTTGCCTT TACAAGTGAT TAATGTCGGG ATTTCTGACC TTCATGTTCC CGTGAAAGAC
GTAAAAACCC TACAAGATTT AGTTCCTCGC TTAGACAGAT TAGCACTATT ATCAAGAAAA
ATGGATATTG TAGGACTACA TTTATTTACT TTTTCTAGTC CTCGAGGCGG GGACTTATTT
GTCCGAAACT TCGCTCCCTT AGTAGGAATA GATGAGGAGG CAGCAACTGG CTCTGCAAAT
AGTGGATTAG CTTACTATTT GGCCCAATAC GGAGCCGTTG ATTATGGGAA AAGATTACTA
ATTGATCAGG GTGACACTCT AGGTAGGCCT TCCAGAATGT ATATAACTCC AGAAGAACAG
GGAAGTGTAC TGGTTGAAGG AACTGGTGTT ACTATTTTCT CAGGGCAGGT GGATATTTTA
TAA
 
Protein sequence
MKAKFFQVDS FTETSFGGNP AGVIISEQEL PRETMQNLAK EVNASETAFV LPGLEFRFFT 
PTVEVSYCGH ATVAAFHALV TSGYLTPDQD GTTYTQTTQE GSFPVTVYPR GNGSPLICTW
KHDKDIEMGD KVSPYVLEDL FYIKNSVNAT FTSVNEFCPM DLPLQVINVG ISDLHVPVKD
VKTLQDLVPR LDRLALLSRK MDIVGLHLFT FSSPRGGDLF VRNFAPLVGI DEEAATGSAN
SGLAYYLAQY GAVDYGKRLL IDQGDTLGRP SRMYITPEEQ GSVLVEGTGV TIFSGQVDIL