Gene Nther_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2861 
Symbol 
ID6316951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3092674 
End bp3093225 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content36% 
IMG OID642645232 
Productprotein tyrosine phosphatase 
Protein accessionYP_001918996 
Protein GI188587451 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0000211952 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGGAG GACTTATTAT TAGGACTATA TTATTTGTTT GCACAGGAAA TACATGTCGT 
AGCCCCATGG CAGAATGGAT CTTTAATAAC AAAGTTGAAG AATGGGGCCT TTCTGATAAA
TTACAAGGAA AATCTGCAGG AATTTTTGCT GTTGATGGAA CTCAAGCATC AGAACATGCC
AAGAAAATAG TTAACTCAAA AGGAGGTGAC TTATCAGAGC ATAGGGCGCA AGTGGTTAAA
CAGGAGTTAG TGGATCAAGC TGATTTAATC CTGACCATGA CAGCTGAGCA AAAACATTTT
GTTGAAAGTA ATTATAGCTC TGATAATAAT AACGCGTCCG TTTATTTAAT TACAGAATAT
GTCTCTAAGT TACTAGAAAA CCCTGAGGAA TTAAATCAGA CAGGCACATC CGAGTCAACT
TCGATCAATA GTTGTAAAGA TGGGGAAAAA AGTGAAGTTA AAGACCCCAT AGGTGGAACC
TATGATGAAT ATCAAGCTGT GTTTTTTGAA TTAGAAGAGT TGATTGAGAT TATTGTGAAG
AACCATAACT AG
 
Protein sequence
MKGGLIIRTI LFVCTGNTCR SPMAEWIFNN KVEEWGLSDK LQGKSAGIFA VDGTQASEHA 
KKIVNSKGGD LSEHRAQVVK QELVDQADLI LTMTAEQKHF VESNYSSDNN NASVYLITEY
VSKLLENPEE LNQTGTSEST SINSCKDGEK SEVKDPIGGT YDEYQAVFFE LEELIEIIVK
NHN