Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2861 |
Symbol | |
ID | 6316951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 3092674 |
End bp | 3093225 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642645232 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001918996 |
Protein GI | 188587451 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0000211952 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAGGAG GACTTATTAT TAGGACTATA TTATTTGTTT GCACAGGAAA TACATGTCGT AGCCCCATGG CAGAATGGAT CTTTAATAAC AAAGTTGAAG AATGGGGCCT TTCTGATAAA TTACAAGGAA AATCTGCAGG AATTTTTGCT GTTGATGGAA CTCAAGCATC AGAACATGCC AAGAAAATAG TTAACTCAAA AGGAGGTGAC TTATCAGAGC ATAGGGCGCA AGTGGTTAAA CAGGAGTTAG TGGATCAAGC TGATTTAATC CTGACCATGA CAGCTGAGCA AAAACATTTT GTTGAAAGTA ATTATAGCTC TGATAATAAT AACGCGTCCG TTTATTTAAT TACAGAATAT GTCTCTAAGT TACTAGAAAA CCCTGAGGAA TTAAATCAGA CAGGCACATC CGAGTCAACT TCGATCAATA GTTGTAAAGA TGGGGAAAAA AGTGAAGTTA AAGACCCCAT AGGTGGAACC TATGATGAAT ATCAAGCTGT GTTTTTTGAA TTAGAAGAGT TGATTGAGAT TATTGTGAAG AACCATAACT AG
|
Protein sequence | MKGGLIIRTI LFVCTGNTCR SPMAEWIFNN KVEEWGLSDK LQGKSAGIFA VDGTQASEHA KKIVNSKGGD LSEHRAQVVK QELVDQADLI LTMTAEQKHF VESNYSSDNN NASVYLITEY VSKLLENPEE LNQTGTSEST SINSCKDGEK SEVKDPIGGT YDEYQAVFFE LEELIEIIVK NHN
|
| |