Gene Nther_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2788 
Symbol 
ID6314744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3011664 
End bp3012596 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content39% 
IMG OID642645160 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001918924 
Protein GI188587379 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA GTACTGATAT CAACAATTCA GATCACCGTG AAAATGGATC TGGAATCATC 
AATAGTTTAC AAGAAAAAGA TTATATTCTT TGGGTGAGAC AGCTCTTAAA AAGTAAGACA
GGTACTGTGG GTTTACTGAT AGTTCTTGGA GTGGTCCTCC TTGCTATTTT TGCACCCTAT
ATTACTCCCC ATGAACCTGA TGCAATGAAT GCGGCTGAAA GGCTCTCACC TCCAAGTTTT
ATAGAGGGAG GGAGTGGAGA ACACATTTTG GGTACTGATA ATGTCGGTAG AGATATATTT
ACCAGAATTT TATATGGAAC GAGAATATCA TTGTTTGTGG GAATCACATC AGTGGTTGTG
GCAGGTATTA TCGGAGTCAC CTTAGGACTA ATAGCTGGTT ACTTTGGAGG AATTGTTGAC
AATATAATTA TGAGAGTTGT GGATGCTTTT TTAGCTATCC CCAACATCTT ACTTATACTG
GTAATACTTG CAGTCTTTGG GCCGAGCTTA TGGACAGTTA TCGGGGTTTT AGGAGCCACC
AATTGGGTGG TTTATGCCAG AATGATCCGG GGCGAGGTTT TGAGCGTTAA AGAACAGGAA
TATGTAAAAG CCAGTAAAAC CATTGGTACT AAAAATACAG CTATTATATT CAAGCATATT
TTACCCAATG TTATGTCTAC TTTTATTGTG ATTTCGACTT TAAGAGTAGC AACTACTATA
ATCTTAGAAG CTTCATTGAG TTTTTTAGGA CTGGGCATTC AGCCACCTCA AGTTTCCTGG
GGTGGAATGT TAAGTGACGG TAGAGACTAT CTTGCTACTG CATGGTGGAT TTCCACTTTT
CCCGGAATAG CCATAACGAT TACAGTATTG GGAATCATTT TTTTGGGTGA CTGGCTAAGA
GATGTCTTGG ACCCTAAAAG TCAAAATGCT TGA
 
Protein sequence
MAQSTDINNS DHRENGSGII NSLQEKDYIL WVRQLLKSKT GTVGLLIVLG VVLLAIFAPY 
ITPHEPDAMN AAERLSPPSF IEGGSGEHIL GTDNVGRDIF TRILYGTRIS LFVGITSVVV
AGIIGVTLGL IAGYFGGIVD NIIMRVVDAF LAIPNILLIL VILAVFGPSL WTVIGVLGAT
NWVVYARMIR GEVLSVKEQE YVKASKTIGT KNTAIIFKHI LPNVMSTFIV ISTLRVATTI
ILEASLSFLG LGIQPPQVSW GGMLSDGRDY LATAWWISTF PGIAITITVL GIIFLGDWLR
DVLDPKSQNA