Gene Nther_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2680 
Symbol 
ID6314507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2889522 
End bp2890724 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content39% 
IMG OID642645058 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001918823 
Protein GI188587278 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.132785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TAGGACTAAT TCCCAGGTTA ATTATTGCAA TCATTCTGGG TACTCTTATT 
GGTCTTTATT TCCCAGAATG GGTAGGGAAC TTGTTGTTTA CTGTTTCCAG CATTTTTGGT
GAATTGCTAT TTTACATTGT TCCTCTTATT ATTTTGGCCT TTATTATCCC AGGTATCGCA
GAATTAGCAG AGAGTCCAGG TAAAATGCTG GGTGCCACCG CAGGTGTAGC TTATTTATCG
ACTATCATTG CAGGTACAAT AGCCTTTTTC GTGGCAATGA TGATTATTCC GGCTATTGCA
CCCGAAATCG TGGAAGTTGA AGAGGATGCA GGACTTTCCC AGTTTATTGA AATTGAAATA
GCACCTATGA TGGAAATCAT GACAGCTCTT GTAACGGCCT TTATCTTTGG TGTTGGTGTA
AATTACTTAA AAAATATCCG CGGTAATAAA ACTCTGTATA ATTTCATGAT GGAATTTCGA
GAGGTTGTGC GCTTGGTAAT TCAAAAAATA ATCATTCCTT TACTACCACT TTACATAGCA
GGTATCTTTG CAGATATGGC TGCTGAGGGT ACTGTGTTTA GAACTATAGG TCTGTTTGCG
CCTCTCTTCG CCTTGGTAAT CGGATTACAA ATACTATACT TAATTTTACA TTTCACTGTT
GCAAACAGAT TGCGACCTGA AAACCCTATT TTCGGTAGCT TAAAGCAAAT GATTCCAGCT
TATACAACTG CCTTGGGGAC AGTTTCTAGT GCAGCTACCT TACCAGTAAC TTTAAGAAGT
GCCAAGAAAT TAAAAGTGCC AGATAATATA GTAGATTTAG TAGTACCTTT AGGAGCTACA
ATTCATCTAG CTGGTAGTAC TATTGCCATA ACCATCAGTG CCGTAACTGT GTATTTGCTT
CATCTCGGTA CACCAGAATT CACCAGCTTT TTCCCTTTTA TTTTGATGCT TGGAATAGTA
ATGATAGGAG CTCCAGGAGT TCCAGGAGGG GCGGTAATGG CCGCTCTAGG CTTATTGAGC
ACTATGTTAG GATTTGGAGA AACAGAACAA GCATTGATGA TTGCAATTTA CATGGGACAG
GATCCCTTTG GAACTGCTTG TAACGTAACA GGAGACGGTG CCAATTCCAT TATTGTGAGT
TCTATAGCCA AAAGAGTGGA AGGTAATAAA GGCAAGAACT CAGAAACAGA AGAAGAAGCT
TAA
 
Protein sequence
MSKLGLIPRL IIAIILGTLI GLYFPEWVGN LLFTVSSIFG ELLFYIVPLI ILAFIIPGIA 
ELAESPGKML GATAGVAYLS TIIAGTIAFF VAMMIIPAIA PEIVEVEEDA GLSQFIEIEI
APMMEIMTAL VTAFIFGVGV NYLKNIRGNK TLYNFMMEFR EVVRLVIQKI IIPLLPLYIA
GIFADMAAEG TVFRTIGLFA PLFALVIGLQ ILYLILHFTV ANRLRPENPI FGSLKQMIPA
YTTALGTVSS AATLPVTLRS AKKLKVPDNI VDLVVPLGAT IHLAGSTIAI TISAVTVYLL
HLGTPEFTSF FPFILMLGIV MIGAPGVPGG AVMAALGLLS TMLGFGETEQ ALMIAIYMGQ
DPFGTACNVT GDGANSIIVS SIAKRVEGNK GKNSETEEEA